Martin H Schaefer
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Explore the profile of Martin H Schaefer including associated specialties, affiliations and a list of published articles.
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42
Citations
1124
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Recent Articles
1.
Blumenthal D, Lucchetta M, Kleist L, Fekete S, List M, Schaefer M
Elife
. 2024 Dec;
13.
PMID: 39660719
Degree distributions in protein-protein interaction (PPI) networks are believed to follow a power law (PL). However, technical and study biases affect the experimental procedures for detecting PPIs. For instance, cancer-associated...
2.
Dallavilla T, Galie S, Sambruni G, Borin S, Fazio N, Fumagalli-Romario U, et al.
Biochim Biophys Acta Mol Basis Dis
. 2024 Jun;
1870(7):167311.
PMID: 38909851
Tumours exhibit significant heterogeneity in their molecular profiles across patients, largely influenced by the tissue of origin, where certain driver gene mutations are predominantly associated with specific cancer types. Here,...
3.
Alfieri F, Caravagna G, Schaefer M
Nat Commun
. 2023 Jul;
14(1):4423.
PMID: 37479721
No abstract available.
4.
Alfieri F, Caravagna G, Schaefer M
Nat Commun
. 2023 Jun;
14(1):3594.
PMID: 37328455
Cancers evolve under the accumulation of thousands of somatic mutations and chromosomal aberrations. While most coding mutations are deleterious, almost all protein-coding genes lack detectable signals of negative selection. This...
5.
Sarkar S, Lucchetta M, Maier A, Abdrabbou M, Baumbach J, List M, et al.
Bioinformatics
. 2023 May;
39(6).
PMID: 37233198
Summary: We present ROBUST-Web which implements our recently presented ROBUST disease module mining algorithm in a user-friendly web application. ROBUST-Web features seamless downstream disease module exploration via integrated gene set...
6.
Sambruni G, Macandog A, Wirbel J, Cagnina D, Catozzi C, Dallavilla T, et al.
Genome Med
. 2023 May;
15(1):32.
PMID: 37131219
Background: The association between microbes and cancer has been reported repeatedly; however, it is not clear if molecular tumour properties are connected to specific microbial colonisation patterns. This is due...
7.
Benisty H, Hernandez-Alias X, Weber M, Anglada-Girotto M, Mantica F, Radusky L, et al.
Cell Syst
. 2023 Mar;
14(4):312-323.e3.
PMID: 36889307
Codon usage influences gene expression distinctly depending on the cell context. Yet, the importance of codon bias in the simultaneous turnover of specific groups of protein-coding genes remains to be...
8.
Hernandez-Alias X, Benisty H, Radusky L, Serrano L, Schaefer M
Genome Biol
. 2023 Feb;
24(1):34.
PMID: 36829202
Background: Codon usage and nucleotide composition of coding sequences have profound effects on protein expression. However, while it is recognized that different tissues have distinct tRNA profiles and codon usages...
9.
Hernandez-Alias X, Katanski C, Zhang W, Assari M, Watkins C, Schaefer M, et al.
Nucleic Acids Res
. 2022 Dec;
51(3):e17.
PMID: 36537222
Transfer RNA (tRNA) utilizes multiple properties of abundance, modification, and aminoacylation in translational regulation. These properties were typically studied one-by-one; however, recent advance in high throughput tRNA sequencing enables their...
10.
Tiberti S, Catozzi C, Croci O, Ballerini M, Cagnina D, Soriani C, et al.
Nat Commun
. 2022 Nov;
13(1):7380.
PMID: 36450724
No abstract available.