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Guilherme Viteri

Explore the profile of Guilherme Viteri including associated specialties, affiliations and a list of published articles. Areas
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Articles 11
Citations 4555
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Recent Articles
1.
Beavers D, Brunson T, Sanati N, Matthews L, Haw R, Shorser S, et al.
Curr Protoc . 2023 Jul; 3(7):e845. PMID: 37467006
Understudied or dark proteins have the potential to shed light on as-yet undiscovered molecular mechanisms that underlie phenotypes and suggest innovative therapeutic approaches for many diseases. The Reactome-IDG (Illuminating the...
2.
Brunson T, Sanati N, Matthews L, Haw R, Beavers D, Shorser S, et al.
bioRxiv . 2023 Jun; PMID: 37333417
Limited knowledge about a substantial portion of protein coding genes, known as "dark" proteins, hinders our understanding of their functions and potential therapeutic applications. To address this, we leveraged Reactome,...
3.
Gillespie M, Jassal B, Stephan R, Milacic M, Rothfels K, Senff-Ribeiro A, et al.
Nucleic Acids Res . 2021 Nov; 50(D1):D687-D692. PMID: 34788843
The Reactome Knowledgebase (https://reactome.org), an Elixir core resource, provides manually curated molecular details across a broad range of physiological and pathological biological processes in humans, including both hereditary and acquired...
4.
Griss J, Viteri G, Sidiropoulos K, Nguyen V, Fabregat A, Hermjakob H
Mol Cell Proteomics . 2020 Sep; 19(12):2115-2125. PMID: 32907876
Pathway analyses are key methods to analyze 'omics experiments. Nevertheless, integrating data from different 'omics technologies and different species still requires considerable bioinformatics knowledge.Here we present the novel ReactomeGSA resource...
5.
Viteri G, Matthews L, Varusai T, Gillespie M, Milacic M, Cook J, et al.
Database (Oxford) . 2019 Dec; 2019. PMID: 31802127
Reactome is a manually curated, open-source, open-data knowledge base of biomolecular pathways. Reactome has always provided clear credit attribution for authors, curators and reviewers through fine-grained annotation of all three...
6.
Jassal B, Matthews L, Viteri G, Gong C, Lorente P, Fabregat A, et al.
Nucleic Acids Res . 2019 Nov; 48(D1):D498-D503. PMID: 31691815
The Reactome Knowledgebase (https://reactome.org) provides molecular details of signal transduction, transport, DNA replication, metabolism and other cellular processes as an ordered network of molecular transformations in a single consistent data...
7.
Fabregat A, Korninger F, Viteri G, Sidiropoulos K, Marin-Garcia P, Ping P, et al.
PLoS Comput Biol . 2018 Jan; 14(1):e1005968. PMID: 29377902
Reactome is a free, open-source, open-data, curated and peer-reviewed knowledgebase of biomolecular pathways. One of its main priorities is to provide easy and efficient access to its high quality curated...
8.
Fabregat A, Sidiropoulos K, Viteri G, Marin-Garcia P, Ping P, Stein L, et al.
Bioinformatics . 2017 Nov; 34(7):1208-1214. PMID: 29186351
Motivation: Reactome is a free, open-source, open-data, curated and peer-reviewed knowledgebase of biomolecular pathways. For web-based pathway visualization, Reactome uses a custom pathway diagram viewer that has been evolved over...
9.
Fabregat A, Jupe S, Matthews L, Sidiropoulos K, Gillespie M, Garapati P, et al.
Nucleic Acids Res . 2017 Nov; 46(D1):D649-D655. PMID: 29145629
The Reactome Knowledgebase (https://reactome.org) provides molecular details of signal transduction, transport, DNA replication, metabolism, and other cellular processes as an ordered network of molecular transformations-an extended version of a classic...
10.
Sidiropoulos K, Viteri G, Sevilla C, Jupe S, Webber M, Orlic-Milacic M, et al.
Bioinformatics . 2017 Oct; 33(21):3461-3467. PMID: 29077811
Motivation: Reactome is a free, open-source, open-data, curated and peer-reviewed knowledge base of biomolecular pathways. Pathways are arranged in a hierarchical structure that largely corresponds to the GO biological process...