» Articles » PMID: 35277708

MITI Minimum Information Guidelines for Highly Multiplexed Tissue Images

Citing Articles

UniFORM: Towards Universal Immunofluorescence Normalization for Multiplex Tissue Imaging.

Wang K, Ait-Ahmad K, Kupp S, Sims Z, Cramer E, Sayar Z bioRxiv. 2024; .

PMID: 39713407 PMC: 11661071. DOI: 10.1101/2024.12.06.626879.


Quality control for single-cell analysis of high-plex tissue profiles using CyLinter.

Baker G, Novikov E, Zhao Z, Vallius T, Davis J, Lin J Nat Methods. 2024; 21(12):2248-2259.

PMID: 39478175 PMC: 11621021. DOI: 10.1038/s41592-024-02328-0.


Consensus tissue domain detection in spatial omics data using multiplex image labeling with regional morphology (MILWRM).

Kaur H, Heiser C, McKinley E, Ventura-Antunes L, Harris C, Roland J Commun Biol. 2024; 7(1):1295.

PMID: 39478141 PMC: 11525554. DOI: 10.1038/s42003-024-06281-8.


Making the most of bioimaging data through interdisciplinary interactions.

Uhlmann V, Hartley M, Moore J, Weisbart E, Zaritsky A J Cell Sci. 2024; 137(20).

PMID: 39440474 PMC: 11529881. DOI: 10.1242/jcs.262139.


Spatial analysis by current multiplexed imaging technologies for the molecular characterisation of cancer tissues.

Semba T, Ishimoto T Br J Cancer. 2024; 131(11):1737-1747.

PMID: 39438630 PMC: 11589153. DOI: 10.1038/s41416-024-02882-6.


References
1.
Bodenmiller B . Multiplexed Epitope-Based Tissue Imaging for Discovery and Healthcare Applications. Cell Syst. 2016; 2(4):225-38. DOI: 10.1016/j.cels.2016.03.008. View

2.
Byrd J, Greene A, Prasad D, Jiang X, Greene C . Responsible, practical genomic data sharing that accelerates research. Nat Rev Genet. 2020; 21(10):615-629. PMC: 7974070. DOI: 10.1038/s41576-020-0257-5. View

3.
Singh I, Kuscuoglu M, Harkins D, Sutton G, Fouts D, Nelson K . OMeta: an ontology-based, data-driven metadata tracking system. BMC Bioinformatics. 2019; 20(1):8. PMC: 6322262. DOI: 10.1186/s12859-018-2580-9. View

4.
Lin J, Wang S, Coy S, Chen Y, Yapp C, Tyler M . Multiplexed 3D atlas of state transitions and immune interaction in colorectal cancer. Cell. 2023; 186(2):363-381.e19. PMC: 10019067. DOI: 10.1016/j.cell.2022.12.028. View

5.
Swedlow J, Goldberg I, Brauner E, Sorger P . Informatics and quantitative analysis in biological imaging. Science. 2003; 300(5616):100-2. PMC: 3522889. DOI: 10.1126/science.1082602. View