Simone Picelli
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Explore the profile of Simone Picelli including associated specialties, affiliations and a list of published articles.
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6683
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Recent Articles
21.
Thutkawkorapin J, Picelli S, Kontham V, Liu T, Nilsson D, Lindblom A
BMC Genet
. 2016 Feb;
17:41.
PMID: 26872740
Background: Heritable factors are well known to increase the risk of cancer in families. Known susceptibility genes account for a small proportion of all colorectal cancer cases. The aim of...
22.
Kretzmer H, Bernhart S, Wang W, Haake A, Weniger M, Bergmann A, et al.
Nat Genet
. 2015 Oct;
47(11):1316-1325.
PMID: 26437030
Although Burkitt lymphomas and follicular lymphomas both have features of germinal center B cells, they are biologically and clinically quite distinct. Here we performed whole-genome bisulfite, genome and transcriptome sequencing...
23.
Marikkannu R, Aravidis C, Rantala J, Picelli S, Adamovic T, Keihas M, et al.
Anticancer Res
. 2015 May;
35(6):3155-65.
PMID: 26026075
Background: Known breast cancer-predisposing genes account for fewer than 25% of all familial breast cancer cases and further studies are required to find the remaining high- and moderate-risk genes. We...
24.
Picelli S, Bjorklund A, Reinius B, Sagasser S, Winberg G, Sandberg R
Genome Res
. 2014 Aug;
24(12):2033-40.
PMID: 25079858
Massively parallel DNA sequencing of thousands of samples in a single machine-run is now possible, but the preparation of the individual sequencing libraries is expensive and time-consuming. Tagmentation-based library construction,...
25.
Hovestadt V, Jones D, Picelli S, Wang W, Kool M, Northcott P, et al.
Nature
. 2014 May;
510(7506):537-41.
PMID: 24847876
Epigenetic alterations, that is, disruption of DNA methylation and chromatin architecture, are now acknowledged as a universal feature of tumorigenesis. Medulloblastoma, a clinically challenging, malignant childhood brain tumour, is no...
26.
Picelli S, Faridani O, Bjorklund A, Winberg G, Sagasser S, Sandberg R
Nat Protoc
. 2014 Jan;
9(1):171-81.
PMID: 24385147
Emerging methods for the accurate quantification of gene expression in individual cells hold promise for revealing the extent, function and origins of cell-to-cell variability. Different high-throughput methods for single-cell RNA-seq...
27.
Picelli S, Bjorklund A, Faridani O, Sagasser S, Winberg G, Sandberg R
Nat Methods
. 2013 Sep;
10(11):1096-8.
PMID: 24056875
Single-cell gene expression analyses hold promise for characterizing cellular heterogeneity, but current methods compromise on either the coverage, the sensitivity or the throughput. Here, we introduce Smart-seq2 with improved reverse...
28.
Picelli S, Lorenzo Bermejo J, Chang-Claude J, Hoffmeister M, Fernandez-Rozadilla C, Carracedo A, et al.
PLoS One
. 2013 Sep;
8(9):e72091.
PMID: 24039736
In the last four years, Genome-Wide Association Studies (GWAS) have identified sixteen low-penetrance polymorphisms on fourteen different loci associated with colorectal cancer (CRC). Due to the low risks conferred by...
29.
Richter J, Schlesner M, Hoffmann S, Kreuz M, Leich E, Burkhardt B, et al.
Nat Genet
. 2012 Nov;
44(12):1316-20.
PMID: 23143595
Burkitt lymphoma is a mature aggressive B-cell lymphoma derived from germinal center B cells. Its cytogenetic hallmark is the Burkitt translocation t(8;14)(q24;q32) and its variants, which juxtapose the MYC oncogene...
30.
Dunlop M, Tenesa A, Farrington S, Ballereau S, Brewster D, Koessler T, et al.
Gut
. 2012 Apr;
62(6):871-81.
PMID: 22490517
Objective: Colorectal cancer (CRC) has a substantial heritable component. Common genetic variation has been shown to contribute to CRC risk. A study was conducted in a large multi-population study to...