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Noah Alexander

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Articles 23
Citations 1299
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Recent Articles
11.
McIntyre A, Ounit R, Afshinnekoo E, Prill R, Henaff E, Alexander N, et al.
Genome Biol . 2019 Apr; 20(1):72. PMID: 30953547
Following publication of the original article [1], the authors would like to highlight the following two corrections.
12.
McIntyre A, Alexander N, Grigorev K, Bezdan D, Sichtig H, Chiu C, et al.
Nat Commun . 2019 Feb; 10(1):579. PMID: 30718479
The DNA base modification N6-methyladenine (mA) is involved in many pathways related to the survival of bacteria and their interactions with hosts. Nanopore sequencing offers a new, portable method to...
13.
Castro-Wallace S, Chiu C, John K, Stahl S, Rubins K, McIntyre A, et al.
Sci Rep . 2017 Dec; 7(1):18022. PMID: 29269933
We evaluated the performance of the MinION DNA sequencer in-flight on the International Space Station (ISS), and benchmarked its performance off-Earth against the MinION, Illumina MiSeq, and PacBio RS II...
14.
McIntyre A, Ounit R, Afshinnekoo E, Prill R, Henaff E, Alexander N, et al.
Genome Biol . 2017 Sep; 18(1):182. PMID: 28934964
Background: One of the main challenges in metagenomics is the identification of microorganisms in clinical and environmental samples. While an extensive and heterogeneous set of computational tools is available to...
15.
Calhoun S, Reed J, Alexander N, Mason C, Deitsch K, Kirkman L
mBio . 2017 Aug; 8(4). PMID: 28790200
The human malaria parasite replicates within circulating red blood cells, where it is subjected to conditions that frequently cause DNA damage. The repair of DNA double-stranded breaks (DSBs) is thought...
16.
McIntyre A, Rizzardi L, Yu A, Alexander N, Rosen G, Botkin D, et al.
NPJ Microgravity . 2017 Jul; 2:16035. PMID: 28725742
Rapid DNA sequencing and analysis has been a long-sought goal in remote research and point-of-care medicine. In microgravity, DNA sequencing can facilitate novel astrobiological research and close monitoring of crew...
17.
Afshinnekoo E, Chou C, Alexander N, Ahsanuddin S, Schuetz A, Mason C
J Biomol Tech . 2017 Mar; 28(1):40-45. PMID: 28337072
Next-generation sequencing (NGS) technologies have ushered in the era of precision medicine, transforming the way we treat cancer patients and diagnose disease. Concomitantly, the advent of these technologies has created...
18.
Tighe S, Afshinnekoo E, Rock T, McGrath K, Alexander N, McIntyre A, et al.
J Biomol Tech . 2017 Mar; 28(1):31-39. PMID: 28337070
The Extreme Microbiome Project (XMP) is a project launched by the Association of Biomolecular Resource Facilities Metagenomics Research Group (ABRF MGRG) that focuses on whole genome shotgun sequencing of extreme...
19.
Zook J, Catoe D, McDaniel J, Vang L, Spies N, Sidow A, et al.
Sci Data . 2016 Jun; 3:160025. PMID: 27271295
The Genome in a Bottle Consortium, hosted by the National Institute of Standards and Technology (NIST) is creating reference materials and data for human genome sequencing, as well as methods...
20.
Afshinnekoo E, Meydan C, Chowdhury S, Jaroudi D, Boyer C, Bernstein N, et al.
Cell Syst . 2016 May; 1(1):97-97.e3. PMID: 27135689
No abstract available.