Irina A Tarasova
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Explore the profile of Irina A Tarasova including associated specialties, affiliations and a list of published articles.
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32
Citations
165
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Recent Articles
11.
Ivanov M, Bubis J, Gorshkov V, Tarasova I, Levitsky L, Solovyeva E, et al.
Anal Chem
. 2022 Sep;
94(38):13068-13075.
PMID: 36094425
Recently, we presented the DirectMS1 method of ultrafast proteome-wide analysis based on minute-long LC gradients and MS1-only mass spectra acquisition. Currently, the method provides the depth of human cell proteome...
12.
Nikitina A, Lipatova A, Goncharov A, Kliuchnikova A, Pyatnitskiy M, Kuznetsova K, et al.
Int J Mol Sci
. 2022 May;
23(9).
PMID: 35563635
Cancer cell lines responded differentially to type I interferon treatment in models of oncolytic therapy using vesicular stomatitis virus (VSV). Two opposite cases were considered in this study, glioblastoma DBTRG-05MG...
13.
Lipatova A, Soboleva A, Gorshkov V, Bubis J, Solovyeva E, Krasnov G, et al.
Cancers (Basel)
. 2021 Nov;
13(21).
PMID: 34771433
Oncolytic viruses have gained momentum in the last decades as a promising tool for cancer treatment. Despite the progress, only a fraction of patients show a positive response to viral...
14.
Levitsky L, Bubis J, Gorshkov M, Tarasova I
J Proteomics
. 2021 Aug;
248:104350.
PMID: 34389500
Characterization of post-translational modifications is among the most challenging tasks in tandem mass spectrometry-based proteomics which has yet to find an efficient solution. The ultra-tolerant (open) database search attempts to...
15.
Gabdrakhmanov I, Gorshkov M, Tarasova I
Biochemistry (Mosc)
. 2021 Apr;
86(3):338-349.
PMID: 33838633
One of the main goals of quantitative proteomics is molecular profiling of cellular response to stress at the protein level. To perform this profiling, statistical analysis of experimental data involves...
16.
Tarasov D, Lychagin A, Yavorovkiy A, Lipina M, Tarasova I
Int Orthop
. 2020 Apr;
44(9):1727-1735.
PMID: 32300831
Objective: To study the correlation between the level of C-reactive protein (CRP) and the severity of pain in the post-operative period with primary total knee arthroplasty and to conduct a...
17.
Bubis J, Spasskaya D, Gorshkov V, Kjeldsen F, Kofanova A, Lekanov D, et al.
Appl Microbiol Biotechnol
. 2020 Mar;
104(9):4027-4041.
PMID: 32157425
Distilled spirits production using Saccharomyces cerevisiae requires understanding of the mechanisms of yeast cell response to alcohol stress. Reportedly, specific mutations in genes of the ubiquitin-proteasome system, e.g., RPN4, may...
18.
Ivanov M, Bubis J, Gorshkov V, Tarasova I, Levitsky L, Lobas A, et al.
Anal Chem
. 2020 Feb;
92(6):4326-4333.
PMID: 32077687
Proteome characterization relies heavily on tandem mass spectrometry (MS/MS) and is thus associated with instrumentation complexity, lengthy analysis time, and limited duty cycle. It was always tempting to implement approaches...
19.
Tarasova I, Chumakov P, Moshkovskii S, Gorshkov M
J Proteomics
. 2018 May;
191:16-21.
PMID: 29777870
Peptide mass shifts were profiled using ultra-tolerant database search strategy for shotgun proteomics data sets of human glioblastoma cell lines demonstrating strong response to the type I interferon (IFNα-2b) treatment....
20.
Levitsky L, Ivanov M, Lobas A, Bubis J, Tarasova I, Solovyeva E, et al.
J Proteome Res
. 2018 Apr;
17(7):2249-2255.
PMID: 29682971
We present an open-source, extensible search engine for shotgun proteomics. Implemented in Python programming language, IdentiPy shows competitive processing speed and sensitivity compared with the state-of-the-art search engines. It is...