Francisco Avila Cobos
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Explore the profile of Francisco Avila Cobos including associated specialties, affiliations and a list of published articles.
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20
Citations
776
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Recent Articles
1.
Van Der Schueren C, Decruyenaere P, Avila Cobos F, Bult J, Deleu J, Dipalo L, et al.
Mol Oncol
. 2024 Apr;
PMID: 38564603
Extracellular RNA (cell-free RNA; exRNA) from blood-derived liquid biopsies is an appealing, minimally invasive source of disease biomarkers. As pre-analytical variables strongly influence exRNA measurements, their reporting is essential for...
2.
Avila Cobos F, Najaf Panah M, Epps J, Long X, Man T, Chiu H, et al.
Genome Biol
. 2023 Aug;
24(1):177.
PMID: 37528411
Background: RNA profiling technologies at single-cell resolutions, including single-cell and single-nuclei RNA sequencing (scRNA-seq and snRNA-seq, scnRNA-seq for short), can help characterize the composition of tissues and reveal cells that...
3.
Schoofs K, Philippron A, Avila Cobos F, Koster J, Lefever S, Anckaert J, et al.
Sci Data
. 2022 Mar;
9(1):86.
PMID: 35288573
In the past decades, the incidence of esophageal adenocarcinoma has increased dramatically in Western populations. Better understanding of disease etiology along with the identification of novel prognostic and predictive biomarkers...
4.
Vergauwen G, Tulkens J, Pinheiro C, Avila Cobos F, Dedeyne S, De Scheerder M, et al.
J Extracell Vesicles
. 2021 Aug;
10(10):e12122.
PMID: 34429857
Separating extracellular vesicles (EV) from blood plasma is challenging and complicates their biological understanding and biomarker development. In this study, we fractionate blood plasma by combining size-exclusion chromatography (SEC) and...
5.
Lorenzi L, Chiu H, Avila Cobos F, Gross S, Volders P, Cannoodt R, et al.
Nat Biotechnol
. 2021 Jun;
39(11):1467.
PMID: 34183863
No abstract available.
6.
Lorenzi L, Chiu H, Avila Cobos F, Gross S, Volders P, Cannoodt R, et al.
Nat Biotechnol
. 2021 Jun;
39(11):1453-1465.
PMID: 34140680
Existing compendia of non-coding RNA (ncRNA) are incomplete, in part because they are derived almost exclusively from small and polyadenylated RNAs. Here we present a more comprehensive atlas of the...
7.
Hulstaert E, Morlion A, Avila Cobos F, Verniers K, Nuytens J, Vanden Eynde E, et al.
Cell Rep
. 2020 Dec;
33(13):108552.
PMID: 33378673
Extracellular RNAs present in biofluids have emerged as potential biomarkers for disease. Where most studies focus on blood-derived fluids, other biofluids may be more informative. We present an atlas of...
8.
Avila Cobos F, Alquicira-Hernandez J, Powell J, Mestdagh P, De Preter K
Nat Commun
. 2020 Dec;
11(1):6291.
PMID: 33268785
A Correction to this paper has been published: https://doi.org/10.1038/s41467-020-20288-9.
9.
Avila Cobos F, Alquicira-Hernandez J, Powell J, Mestdagh P, De Preter K
Nat Commun
. 2020 Nov;
11(1):5650.
PMID: 33159064
Many computational methods have been developed to infer cell type proportions from bulk transcriptomics data. However, an evaluation of the impact of data transformation, pre-processing, marker selection, cell type composition...
10.
Velazquez C, K D, Esteban-Cardenosa E, Avila Cobos F, Lastra E, Abella L, et al.
Cancers (Basel)
. 2020 Aug;
12(8).
PMID: 32756499
In this study, we aim to gain insight in the germline mutation spectrum of , , , , , and in breast and ovarian cancer families from Spain. We have...