Dmitry E Andreev
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Explore the profile of Dmitry E Andreev including associated specialties, affiliations and a list of published articles.
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25
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826
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Recent Articles
1.
Andreev D, Shatsky I
Biochemistry (Mosc)
. 2025 Mar;
90(1):32-43.
PMID: 40058972
Recent advances in functional genomics have allowed identification of thousands of translated short open reading frames (sORFs) in the 5' leaders of mammalian mRNA transcripts. While most sORFs are unlikely...
2.
Loughran G, Andreev D, Terenin I, Namy O, Mikl M, Yordanova M, et al.
Nat Struct Mol Biol
. 2025 Mar;
PMID: 40033152
Dual reporters encoding two distinct proteins within the same mRNA have had a crucial role in identifying and characterizing unconventional mechanisms of eukaryotic translation. These mechanisms include initiation via internal...
3.
Yordanova M, Slattery C, Baranova-Gurvich M, Engels M, Ting O, Swirski M, et al.
Res Sq
. 2025 Jan;
PMID: 39764142
Background: Nucleotide sequence can be translated in three reading frames from 5' to 3' producing distinct protein products. Many examples of RNA translation in two reading frames (dual coding) have...
4.
Fedorova A, Kiniry S, Andreev D, Mudge J, Baranov P
Nat Commun
. 2024 Jan;
15(1):228.
PMID: 38172129
No abstract available.
5.
Fedorova A, Kiniry S, Andreev D, Mudge J, Baranov P
Nat Commun
. 2022 Dec;
13(1):7910.
PMID: 36564405
The synthesis of most proteins begins at AUG codons, yet a small number of non-AUG initiated proteoforms are also known. Here we analyse a large number of publicly available Ribo-seq...
6.
Andreev D, Niepmann M, Shatsky I
Int J Mol Sci
. 2022 Dec;
23(24).
PMID: 36555135
The phenomenon of internal initiation of translation was discovered in 1988 on poliovirus mRNA. The prototypic -acting element in the 5' untranslated region (5'UTR) of poliovirus mRNA, which is able...
7.
Zhdanov A, Golubeva A, Yordanova M, Andreev D, Ventura-Silva A, Schellekens H, et al.
Cell Mol Life Sci
. 2022 Jul;
79(8):426.
PMID: 35841486
Activated ghrelin receptor GHS-R1α triggers cell signalling pathways that modulate energy homeostasis and biosynthetic processes. However, the effects of ghrelin on mRNA translation are unknown. Using various reporter assays, here...
8.
Andreev D, Loughran G, Fedorova A, Mikhaylova M, Shatsky I, Baranov P
Genome Biol
. 2022 May;
23(1):111.
PMID: 35534899
Recent proteogenomic studies revealed extensive translation outside of annotated protein coding regions, such as non-coding RNAs and untranslated regions of mRNAs. This non-canonical translation is largely due to start codon...
9.
Uchenunu O, Zhdanov A, Hutton P, Jovanovic P, Wang Y, Andreev D, et al.
FEBS Open Bio
. 2022 Mar;
12(5):959-982.
PMID: 35302710
Mutations in genes encoding cytochrome c oxidase (mitochondrial complex IV) subunits and assembly factors [e.g., synthesis of cytochrome c oxidase 2 (SCO2)] are linked to severe metabolic syndromes. Notwithstanding that...
10.
Andreev D, Smirnova V, Shatsky I
Biochemistry (Mosc)
. 2021 Sep;
86(9):1095-1106.
PMID: 34565313
Ribosome profiling (riboseq) has opened the possibilities for the genome-wide studies of translation in all living organisms. This method is based on deep sequencing of mRNA fragments protected by the...