Cyrus Afrasiabi
Overview
Explore the profile of Cyrus Afrasiabi including associated specialties, affiliations and a list of published articles.
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10
Citations
491
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Recent Articles
1.
Dommer J, Van Doorslaer K, Afrasiabi C, Browne K, Ezeji S, Kim L, et al.
J Mol Biol
. 2024 Dec;
:168925.
PMID: 39732323
The Papilloma Virus Episteme (PaVE) https://pave.niaid.nih.gov/ was initiated by NIAID in 2008 to provide a highly curated bioinformatic and knowledge resource for the papillomavirus scientific community. It rapidly became the...
2.
Lelong S, Zhou X, Afrasiabi C, Qian Z, Cano M, Tsueng G, et al.
Bioinformatics
. 2022 Jan;
38(7):2077-2079.
PMID: 35020801
Summary: To meet the increased need of making biomedical resources more accessible and reusable, Web Application Programming Interfaces (APIs) or web services have become a common way to disseminate knowledge...
3.
Putman T, Hybiske K, Jow D, Afrasiabi C, Lelong S, Cano M, et al.
Database (Oxford)
. 2019 Jun;
2019.
PMID: 31211397
No abstract available.
4.
Putman T, Hybiske K, Jow D, Afrasiabi C, Lelong S, Cano M, et al.
Database (Oxford)
. 2019 Apr;
2019.
PMID: 30985891
The accelerating growth of genomic and proteomic information for Chlamydia species, coupled with unique biological aspects of these pathogens, necessitates bioinformatic tools and features that are not provided by major...
5.
Bush S, Freem L, MacCallum A, ODell J, Wu C, Afrasiabi C, et al.
BMC Genomics
. 2018 Aug;
19(1):594.
PMID: 30086717
Background: The domestic chicken (Gallus gallus) is widely used as a model in developmental biology and is also an important livestock species. We describe a novel approach to data integration...
6.
Xin J, Afrasiabi C, Lelong S, Adesara J, Tsueng G, Su A, et al.
BMC Bioinformatics
. 2018 Feb;
19(1):30.
PMID: 29390967
Background: Application Programming Interfaces (APIs) are now widely used to distribute biological data. And many popular biological APIs developed by many different research teams have adopted Javascript Object Notation (JSON)...
7.
Clark E, Bush S, McCulloch M, Farquhar I, Young R, Lefevre L, et al.
PLoS Genet
. 2017 Sep;
13(9):e1006997.
PMID: 28915238
Sheep are a key source of meat, milk and fibre for the global livestock sector, and an important biomedical model. Global analysis of gene expression across multiple tissues has aided...
8.
Xin J, Mark A, Afrasiabi C, Tsueng G, Juchler M, Gopal N, et al.
Genome Biol
. 2016 May;
17(1):91.
PMID: 27154141
Efficient tools for data management and integration are essential for many aspects of high-throughput biology. In particular, annotations of genes and human genetic variants are commonly used but highly fragmented...
9.
Wu C, Jin X, Tsueng G, Afrasiabi C, Su A
Nucleic Acids Res
. 2015 Nov;
44(D1):D313-6.
PMID: 26578587
BioGPS (http://biogps.org) is a centralized gene-annotation portal that enables researchers to access distributed gene annotation resources. This article focuses on the updates to BioGPS since our last paper (2013 database...
10.
Afrasiabi C, Samad B, Dineen D, Meacham C, Sjolander K
Nucleic Acids Res
. 2013 May;
41(Web Server issue):W242-8.
PMID: 23685612
The PhyloFacts 'Fast Approximate Tree Classification' (FAT-CAT) web server provides a novel approach to ortholog identification using subtree hidden Markov model-based placement of protein sequences to phylogenomic orthology groups in...