Arthur L Delcher
Overview
Explore the profile of Arthur L Delcher including associated specialties, affiliations and a list of published articles.
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39
Citations
14661
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Recent Articles
1.
Marcais G, Delcher A, Phillippy A, Coston R, Salzberg S, Zimin A
PLoS Comput Biol
. 2018 Jan;
14(1):e1005944.
PMID: 29373581
The MUMmer system and the genome sequence aligner nucmer included within it are among the most widely used alignment packages in genomics. Since the last major release of MUMmer version...
2.
Dara A, Drabek E, Travassos M, Moser K, Delcher A, Su Q, et al.
Genome Med
. 2017 Mar;
9(1):30.
PMID: 28351419
Background: Encoded by the var gene family, highly variable Plasmodium falciparum erythrocyte membrane protein-1 (PfEMP1) proteins mediate tissue-specific cytoadherence of infected erythrocytes, resulting in immune evasion and severe malaria disease....
3.
Schatz M, Phillippy A, Sommer D, Delcher A, Puiu D, Narzisi G, et al.
Brief Bioinform
. 2011 Dec;
14(2):213-24.
PMID: 22199379
Since its launch in 2004, the open-source AMOS project has released several innovative DNA sequence analysis applications including: Hawkeye, a visual analytics tool for inspecting the structure of genome assemblies;...
4.
Salzberg S, Phillippy A, Zimin A, Puiu D, Magoc T, Koren S, et al.
Genome Res
. 2011 Dec;
22(3):557-67.
PMID: 22147368
New sequencing technology has dramatically altered the landscape of whole-genome sequencing, allowing scientists to initiate numerous projects to decode the genomes of previously unsequenced organisms. The lowest-cost technology can generate...
5.
Kelley D, Liu B, Delcher A, Pop M, Salzberg S
Nucleic Acids Res
. 2011 Nov;
40(1):e9.
PMID: 22102569
Environmental shotgun sequencing (or metagenomics) is widely used to survey the communities of microbial organisms that live in many diverse ecosystems, such as the human body. Finding the protein-coding genes...
6.
Bogdanove A, Koebnik R, Lu H, Furutani A, Angiuoli S, Patil P, et al.
J Bacteriol
. 2011 Jul;
193(19):5450-64.
PMID: 21784931
Xanthomonas is a large genus of bacteria that collectively cause disease on more than 300 plant species. The broad host range of the genus contrasts with stringent host and tissue...
7.
Adekambi T, Butler R, Hanrahan F, Delcher A, Drancourt M, Shinnick T
PLoS One
. 2011 Apr;
6(3):e14792.
PMID: 21483493
Comparative genomic sequencing is shedding new light on bacterial identification, taxonomy and phylogeny. An in silico assessment of a core gene set necessary for cellular functioning was made to determine...
8.
Shulaev V, Sargent D, Crowhurst R, Mockler T, Folkerts O, Delcher A, et al.
Nat Genet
. 2010 Dec;
43(2):109-16.
PMID: 21186353
The woodland strawberry, Fragaria vesca (2n = 2x = 14), is a versatile experimental plant system. This diminutive herbaceous perennial has a small genome (240 Mb), is amenable to genetic...
9.
Miller T, Delcher A, Salzberg S, Saunders E, Detter J, Halden R
J Bacteriol
. 2010 Sep;
192(22):6101-2.
PMID: 20833805
Pollutants such as polychlorinated biphenyls and dioxins pose a serious threat to human and environmental health. Natural attenuation of these compounds by microorganisms provides one promising avenue for their removal...
10.
Schatz M, Delcher A, Salzberg S
Genome Res
. 2010 May;
20(9):1165-73.
PMID: 20508146
Second-generation sequencing technology can now be used to sequence an entire human genome in a matter of days and at low cost. Sequence read lengths, initially very short, have rapidly...