» Articles » PMID: 8381814

Strain Identification of Mycobacterium Tuberculosis by DNA Fingerprinting: Recommendations for a Standardized Methodology

Overview
Specialty Microbiology
Date 1993 Feb 1
PMID 8381814
Citations 963
Authors
Affiliations
Soon will be listed here.
Abstract

DNA fingerprinting of Mycobacterium tuberculosis has been shown to be a powerful epidemiologic tool. We propose a standardized technique which exploits variability in both the number and genomic position of IS6110 to generate strain-specific patterns. General use of this technique will permit comparison of results between different laboratories. Such comparisons will facilitate investigations into the international transmission of tuberculosis and may identify specific strains with unique properties such as high infectivity, virulence, or drug resistance.

Citing Articles

Whole genomic analysis uncovers high genetic diversity of rifampicin-resistant strains in Botswana.

Mogashoa T, Loubser J, Choga O, Ngom J, Choga W, Mbulawa M Front Microbiol. 2025; 16:1535160.

PMID: 40008038 PMC: 11855114. DOI: 10.3389/fmicb.2025.1535160.


Assessing the propensity of TB clinical isolates to form viable but non-replicating subpopulations.

Coetzee J, Kriel N, Loubser J, Dippenaar A, Sampson S, Malherbe S Sci Rep. 2024; 14(1):27686.

PMID: 39532967 PMC: 11557868. DOI: 10.1038/s41598-024-79389-w.


Clinical and Molecular Characterization of Human Burkholderia mallei Infection, Brazil.

Luz K, Bezerra F, Sicolo M, Silva A, Egito A, Suniga P Emerg Infect Dis. 2024; 30(11):2400-2403.

PMID: 39447175 PMC: 11521173. DOI: 10.3201/eid3011.240549.


Detection of multidrug-resistance in Mycobacterium tuberculosis by phenotype- and molecular-based assays.

Vasiliauskaite L, Bakula Z, Vasiliauskiene E, Bakonyte D, Decewicz P, Dziurzynski M Ann Clin Microbiol Antimicrob. 2024; 23(1):81.

PMID: 39198827 PMC: 11360294. DOI: 10.1186/s12941-024-00741-z.


Bridging the gap between molecular and genomic epidemiology in tuberculosis: inferring MIRU-VNTR patterns from genomic data.

Buenestado-Serrano S, Martinez-Lirola M, Dippenaar A, Sanz-Perez A, Garrido-Cardenas J, Esteban-Garcia A J Clin Microbiol. 2024; 62(9):e0074124.

PMID: 39136450 PMC: 11389143. DOI: 10.1128/jcm.00741-24.


References
1.
Zainuddin Z, Dale J . Polymorphic repetitive DNA sequences in Mycobacterium tuberculosis detected with a gene probe from a Mycobacterium fortuitum plasmid. J Gen Microbiol. 1989; 135(9):2347-55. DOI: 10.1099/00221287-135-9-2347. View

2.
McAdam R, Hermans P, van Soolingen D, Zainuddin Z, Catty D, van Embden J . Characterization of a Mycobacterium tuberculosis insertion sequence belonging to the IS3 family. Mol Microbiol. 1990; 4(9):1607-13. DOI: 10.1111/j.1365-2958.1990.tb02073.x. View

3.
Fomukong N, Dale J, Osborn T, Grange J . Use of gene probes based on the insertion sequence IS986 to differentiate between BCG vaccine strains. J Appl Bacteriol. 1992; 72(2):126-33. DOI: 10.1111/j.1365-2672.1992.tb01813.x. View

4.
Mazurek G, Cave M, Eisenach K, Wallace Jr R, Bates J, Crawford J . Chromosomal DNA fingerprint patterns produced with IS6110 as strain-specific markers for epidemiologic study of tuberculosis. J Clin Microbiol. 1991; 29(9):2030-3. PMC: 270253. DOI: 10.1128/jcm.29.9.2030-2033.1991. View

5.
Eisenach K, Crawford J, Bates J . Repetitive DNA sequences as probes for Mycobacterium tuberculosis. J Clin Microbiol. 1988; 26(11):2240-5. PMC: 266867. DOI: 10.1128/jcm.26.11.2240-2245.1988. View