» Articles » PMID: 35920752

N-Detected TROSY NMR Experiments to Study Large Disordered Proteins in High-field Magnets

Overview
Specialty Chemistry
Date 2022 Aug 3
PMID 35920752
Authors
Affiliations
Soon will be listed here.
Abstract

Intrinsically disordered regions (IDRs) of proteins are critical in the regulation of biological processes but difficult to study structurally. Nuclear magnetic resonance (NMR) is uniquely equipped to provide structural information on IDRs at atomic resolution; however, existing NMR methods often pose a challenge for large molecular weight IDRs. Resonance assignment of IDRs using N-detection was previously demonstrated and shown to overcome some of these limitations. Here, we improve the methodology by overcoming the need for deuterated buffers and provide better sensitivity and resolution at higher magnetic fields and physiological salt concentrations using transverse relaxation optimized spectroscopy (TROSY). Finally, large disordered regions with low sequence complexity can be assigned efficiently using these new methods as demonstrated by achieving near complete assignment of the 398-residue N-terminal IDR of the transcription factor NFAT1 harboring 18% prolines.

Citing Articles

N-detected TROSY for H-N heteronuclear correlation to study intrinsically disordered proteins: strategies to increase spectral quality.

Rodella M, Schneider R, Kummerle R, Felli I, Pierattelli R J Biomol NMR. 2025; 79(1):15-24.

PMID: 39841395 PMC: 11832566. DOI: 10.1007/s10858-024-00453-8.


Efficient and economic protein labeling for NMR in mammalian expression systems: Application to a preT-cell and T-cell receptor protein.

Mallis R, Lee J, van den Berg A, Brazin K, Viennet T, Zmuda J Protein Sci. 2024; 33(4):e4950.

PMID: 38511503 PMC: 10955624. DOI: 10.1002/pro.4950.

References
1.
Abyzov A, Salvi N, Schneider R, Maurin D, Ruigrok R, Jensen M . Identification of Dynamic Modes in an Intrinsically Disordered Protein Using Temperature-Dependent NMR Relaxation. J Am Chem Soc. 2016; 138(19):6240-51. DOI: 10.1021/jacs.6b02424. View

2.
Dyson H, Wright P . NMR illuminates intrinsic disorder. Curr Opin Struct Biol. 2021; 70:44-52. PMC: 8530845. DOI: 10.1016/j.sbi.2021.03.015. View

3.
Gal M, Edmonds K, Milbradt A, Takeuchi K, Wagner G . Speeding up direct (15)N detection: hCaN 2D NMR experiment. J Biomol NMR. 2011; 51(4):497-504. PMC: 3338130. DOI: 10.1007/s10858-011-9580-7. View

4.
Camacho-Zarco A, Schnapka V, Guseva S, Abyzov A, Adamski W, Milles S . NMR Provides Unique Insight into the Functional Dynamics and Interactions of Intrinsically Disordered Proteins. Chem Rev. 2022; 122(10):9331-9356. PMC: 9136928. DOI: 10.1021/acs.chemrev.1c01023. View

5.
Bermel W, Bertini I, Felli I, Pierattelli R . Speeding up (13)C direct detection biomolecular NMR spectroscopy. J Am Chem Soc. 2009; 131(42):15339-45. DOI: 10.1021/ja9058525. View