» Articles » PMID: 28798251

LungMAP: The Molecular Atlas of Lung Development Program

Abstract

The National Heart, Lung, and Blood Institute is funding an effort to create a molecular atlas of the developing lung (LungMAP) to serve as a research resource and public education tool. The lung is a complex organ with lengthy development time driven by interactive gene networks and dynamic cross talk among multiple cell types to control and coordinate lineage specification, cell proliferation, differentiation, migration, morphogenesis, and injury repair. A better understanding of the processes that regulate lung development, particularly alveologenesis, will have a significant impact on survival rates for premature infants born with incomplete lung development and will facilitate lung injury repair and regeneration in adults. A consortium of four research centers, a data coordinating center, and a human tissue repository provides high-quality molecular data of developing human and mouse lungs. LungMAP includes mouse and human data for cross correlation of developmental processes across species. LungMAP is generating foundational data and analysis, creating a web portal for presentation of results and public sharing of data sets, establishing a repository of young human lung tissues obtained through organ donor organizations, and developing a comprehensive lung ontology that incorporates the latest findings of the consortium. The LungMAP website (www.lungmap.net) currently contains more than 6,000 high-resolution lung images and transcriptomic, proteomic, and lipidomic human and mouse data and provides scientific information to stimulate interest in research careers for young audiences. This paper presents a brief description of research conducted by the consortium, database, and portal development and upcoming features that will enhance the LungMAP experience for a community of users.

Citing Articles

Human BioMolecular Atlas Program (HuBMAP): 3D Human Reference Atlas construction and usage.

Borner K, Blood P, Silverstein J, Ruffalo M, Satija R, Teichmann S Nat Methods. 2025; .

PMID: 40082611 DOI: 10.1038/s41592-024-02563-5.


Spatial top-down proteomics for the functional characterization of human kidney.

Zemaitis K, Fulcher J, Kumar R, Degnan D, Lewis L, Liao Y Clin Proteomics. 2025; 22(1):9.

PMID: 40045235 PMC: 11881370. DOI: 10.1186/s12014-025-09531-x.


Two- and Three-Dimensional Culture Systems: Respiratory In Vitro Tissue Models for Chemical Screening and Risk-Based Decision Making.

Wallace J, McElroy M, Klausner M, Corley R, Ayehunie S Pharmaceuticals (Basel). 2025; 18(1).

PMID: 39861174 PMC: 11768377. DOI: 10.3390/ph18010113.


High-throughput gene expression analysis with TempO-LINC sensitively resolves complex brain, lung and kidney heterogeneity at single-cell resolution.

Eastburn D, White K, Jayne N, Camiolo S, Montis G, Ha S Sci Rep. 2024; 14(1):31285.

PMID: 39732835 PMC: 11682069. DOI: 10.1038/s41598-024-82736-6.


High-throughput gene expression analysis with TempO-LINC sensitively resolves complex brain, lung and kidney heterogeneity at single-cell resolution.

Eastburn D, White K, Jayne N, Camiolo S, Montis G, Ha S bioRxiv. 2024; .

PMID: 39149288 PMC: 11326174. DOI: 10.1101/2024.08.03.606484.


References
1.
Maeda Y, Dave V, Whitsett J . Transcriptional control of lung morphogenesis. Physiol Rev. 2007; 87(1):219-44. DOI: 10.1152/physrev.00028.2006. View

2.
Swarr D, Morrisey E . Lung endoderm morphogenesis: gasping for form and function. Annu Rev Cell Dev Biol. 2015; 31:553-73. PMC: 5051950. DOI: 10.1146/annurev-cellbio-100814-125249. View

3.
Whitsett J . The molecular era of surfactant biology. Neonatology. 2014; 105(4):337-43. PMC: 4108987. DOI: 10.1159/000360649. View

4.
Du Y, Kitzmiller J, Sridharan A, Perl A, Bridges J, Misra R . Lung Gene Expression Analysis (LGEA): an integrative web portal for comprehensive gene expression data analysis in lung development. Thorax. 2017; 72(5):481-484. PMC: 5520249. DOI: 10.1136/thoraxjnl-2016-209598. View

5.
Warburton D . Overview of Lung Development in the Newborn Human. Neonatology. 2017; 111(4):398-401. PMC: 5538827. DOI: 10.1159/000458465. View