» Articles » PMID: 20383131

QIIME Allows Analysis of High-throughput Community Sequencing Data

Citing Articles

The role of urinary microbiota in primary and recurrent bladder cancer: insights from a propensity score matching study.

Sheng Z, Xu J, Wang M, Xu X, Zhu J, Zeng S BMC Cancer. 2025; 25(1):468.

PMID: 40087655 DOI: 10.1186/s12885-025-13817-6.


Early-life gut microbiome is associated with behavioral disorders in the Rio birth cohort.

Naspolini N, Natividade A, Asmus C, Moreira J, Dominguez-Bello M, Meyer A Sci Rep. 2025; 15(1):8674.

PMID: 40082490 PMC: 11906608. DOI: 10.1038/s41598-024-81774-4.


Evaluation of gut microbiota alterations following orlistat administration in obese mice.

Xue C, Wang T, Chen Y, Zhang H, Wang H, Li Q Front Endocrinol (Lausanne). 2025; 15:1337245.

PMID: 40078888 PMC: 11896870. DOI: 10.3389/fendo.2024.1337245.


Biliary-intestinal anastomosis leads to alterations in intestinal flora and its flora metabolites and increases the risk of long-term postoperative complications: a case-control study.

Li B, Chen Z, Wang G, Chen Y, Hou X, Lu B Front Microbiol. 2025; 16:1531955.

PMID: 40078541 PMC: 11900546. DOI: 10.3389/fmicb.2025.1531955.


Impact of Reduced Dietary Crude Protein and Propionic Acid Preservation on Intestinal Health and Growth Performance in Post-Weaned Pigs.

Connolly K, Sweeney T, Ryan M, Vigors S, ODoherty J Animals (Basel). 2025; 15(5).

PMID: 40075985 PMC: 11899430. DOI: 10.3390/ani15050702.


References
1.
Schloss P, Westcott S, Ryabin T, Hall J, Hartmann M, Hollister E . Introducing mothur: open-source, platform-independent, community-supported software for describing and comparing microbial communities. Appl Environ Microbiol. 2009; 75(23):7537-41. PMC: 2786419. DOI: 10.1128/AEM.01541-09. View

2.
Hamady M, Walker J, Harris J, Gold N, Knight R . Error-correcting barcoded primers for pyrosequencing hundreds of samples in multiplex. Nat Methods. 2008; 5(3):235-7. PMC: 3439997. DOI: 10.1038/nmeth.1184. View

3.
Hopkin M . Ecology: spying on nature. Nature. 2006; 444(7118):420-1. DOI: 10.1038/444420a. View

4.
Cole J, Wang Q, Cardenas E, Fish J, Chai B, Farris R . The Ribosomal Database Project: improved alignments and new tools for rRNA analysis. Nucleic Acids Res. 2008; 37(Database issue):D141-5. PMC: 2686447. DOI: 10.1093/nar/gkn879. View

5.
Peterson J, Garges S, Giovanni M, McInnes P, Wang L, Schloss J . The NIH Human Microbiome Project. Genome Res. 2009; 19(12):2317-23. PMC: 2792171. DOI: 10.1101/gr.096651.109. View