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Daniel McDonald

Explore the profile of Daniel McDonald including associated specialties, affiliations and a list of published articles. Areas
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Articles 166
Citations 46949
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Recent Articles
1.
Salido R, Zhao H, McDonald D, Mannochio-Russo H, Zuffa S, Oles R, et al.
Cell . 2025 Feb; PMID: 40020666
Space habitation provides unique challenges in built environments isolated from Earth. We produced a 3D map of the microbes and metabolites throughout the United States Orbital Segment (USOS) of the...
2.
Martino C, Kellman B, Sandoval D, Clausen T, Cooper R, Benjdia A, et al.
mBio . 2025 Feb; :e0401524. PMID: 39998226
The gastrointestinal (GI) tract is a site of replication of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) and GI symptoms are often reported by patients. SARS-CoV-2 cell entry depends upon...
3.
Taylor B, Weldon K, Ellis R, Franklin D, Groth T, Gentry E, et al.
mSystems . 2025 Feb; :e0130524. PMID: 39898649
No abstract available.
4.
Guccione C, Sfiligoi I, Gonzalez A, Shaffer J, Kazachkova M, Weng Y, et al.
bioRxiv . 2025 Jan; PMID: 39868296
Mathematical modeling of somatic evolution, a process impacting both host cells and microbial communities in the human body, can capture important dynamics driving carcinogenesis. Here we considered models for esophageal...
5.
Abdill R, Graham S, Rubinetti V, Ahmadian M, Hicks P, Chetty A, et al.
Cell . 2025 Jan; 188(4):1100-1118.e17. PMID: 39848248
The factors shaping human microbiome variation are a major focus of biomedical research. While other fields have used large sequencing compendia to extract insights requiring otherwise impractical sample sizes, the...
6.
Guccione C, Patel L, Tomofuji Y, McDonald D, Gonzalez A, Sepich-Poore G, et al.
Nat Commun . 2025 Jan; 16(1):825. PMID: 39827261
As next-generation sequencing technologies produce deeper genome coverages at lower costs, there is a critical need for reliable computational host DNA removal in metagenomic data. We find that insufficient host...
7.
Dilmore A, Kuplicki R, McDonald D, Kumar M, Estaki M, Youngblut N, et al.
Mol Psychiatry . 2025 Jan; PMID: 39794490
This study investigated the relationship between gut microbiota and neuropsychiatric disorders (NPDs), specifically anxiety disorder (ANXD) and/or major depressive disorder (MDD), as defined by Diagnostic and Statistical Manual of Mental...
8.
Walton A, Manno M, Dauenhauer P, Frisbie C, McDonald D
ACS Meas Sci Au . 2024 Dec; 4(6):659-667. PMID: 39713027
The diversification of electronic materials in devices provides a strong incentive for methods to rapidly correlate device performance with fabrication decisions. In this work, we present a low-cost automated test...
9.
Brennan C, Salido R, Belda-Ferre P, Bryant M, Cowart C, Tiu M, et al.
mSystems . 2024 Dec; 10(1):e0128824. PMID: 39670765
No abstract available.
10.
Martinelli F, Heinken A, Henning A, Ulmer M, Hensen T, Gonzalez A, et al.
Sci Rep . 2024 Nov; 14(1):27692. PMID: 39532987
No abstract available.