Swarnendu Tripathi
Overview
Explore the profile of Swarnendu Tripathi including associated specialties, affiliations and a list of published articles.
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Articles
26
Citations
283
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Recent Articles
1.
Dsouza N, Haque N, Tripathi S, Zimmermann M
Int J Mol Sci
. 2024 Nov;
25(22).
PMID: 39596086
Clinical genomics sequencing is rapidly expanding the number of variants that need to be functionally elucidated. Interpreting genetic variants (i.e., mutations) usually begins by identifying how they affect protein-coding sequences....
2.
Chandra B, Tripathi S, Kriwacki R
Nat Chem
. 2024 Oct;
16(11):1743-1745.
PMID: 39438761
No abstract available.
3.
Tripathi S, Shirnekhi H, Gorman S, Chandra B, Baggett D, Park C, et al.
Nat Commun
. 2023 Sep;
14(1):6008.
PMID: 37770423
Fusion oncoproteins (FOs) arise from chromosomal translocations in ~17% of cancers and are often oncogenic drivers. Although some FOs can promote oncogenesis by undergoing liquid-liquid phase separation (LLPS) to form...
4.
Baggett D, Medyukhina A, Tripathi S, Shirnekhi H, Wu H, Pounds S, et al.
Front Bioinform
. 2022 Oct;
2:897238.
PMID: 36304323
Biomolecular condensates are cellular organelles formed through liquid-liquid phase separation (LLPS) that play critical roles in cellular functions including signaling, transcription, translation, and stress response. Importantly, condensate misregulation is associated...
5.
Cousin M, Veale E, Dsouza N, Tripathi S, Holden R, Arelin M, et al.
Genome Med
. 2022 Jun;
14(1):62.
PMID: 35698242
Background: Genomics enables individualized diagnosis and treatment, but large challenges remain to functionally interpret rare variants. To date, only one causative variant has been described for KCNK9 imprinting syndrome (KIS)....
6.
Tripathi S, Dsouza N, Mathison A, Leverence E, Urrutia R, Zimmermann M
Comput Struct Biotechnol J
. 2022 Jan;
20:117-127.
PMID: 34976316
In the current study, we report computational scores for advancing genomic interpretation of disease-associated genomic variation in members of the RAS family of genes. For this purpose, we applied 31...
7.
Chandra B, Michmerhuizen N, Shirnekhi H, Tripathi S, Pioso B, Baggett D, et al.
Cancer Discov
. 2021 Dec;
12(4):1152-1169.
PMID: 34903620
Significance: We show that homotypic and heterotypic mechanisms of LLPS control NUP98-HOXA9 puncta formation, modulating transcriptional activity and transforming hematopoietic cells. Importantly, these mechanisms are generalizable to other NUP98 FOs...
8.
Stodola T, Chi Y, de Assuncao T, Leverence E, Tripathi S, Dsouza N, et al.
Proteins
. 2021 Aug;
90(1):282-298.
PMID: 34414607
Disruptor of telomeric silencing 1-like (DOT1L) is the only non-SET domain histone lysine methyltransferase (KMT) and writer of H3K79 methylation on nucleosomes marked by H2B ubiquitination. DOT1L has elicited significant...
9.
Cousin M, Creighton B, Breau K, Spillmann R, Torti E, Dontu S, et al.
Nat Genet
. 2021 Jul;
53(7):1006-1021.
PMID: 34211179
SPTBN1 encodes βII-spectrin, the ubiquitously expressed β-spectrin that forms micrometer-scale networks associated with plasma membranes. Mice deficient in neuronal βII-spectrin have defects in cortical organization, developmental delay and behavioral deficiencies....
10.
Chi Y, Stodola T, de Assuncao T, Leverence E, Tripathi S, Dsouza N, et al.
Orphanet J Rare Dis
. 2021 Jun;
16(1):247.
PMID: 34074320
No abstract available.