Matthew Pendleton
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Explore the profile of Matthew Pendleton including associated specialties, affiliations and a list of published articles.
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12
Citations
1606
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Recent Articles
1.
Grochowski C, Bengtsson J, Du H, Gandhi M, Lun M, Mehaffey M, et al.
Cell Genom
. 2024 Jun;
4(7):100590.
PMID: 38908378
The duplication-triplication/inverted-duplication (DUP-TRP/INV-DUP) structure is a complex genomic rearrangement (CGR). Although it has been identified as an important pathogenic DNA mutation signature in genomic disorders and cancer genomes, its architecture...
2.
Grochowski C, Bengtsson J, Du H, Gandhi M, Lun M, Mehaffey M, et al.
bioRxiv
. 2023 Oct;
PMID: 37873367
Background: The duplication-triplication/inverted-duplication (DUP-TRP/INV-DUP) structure is a type of complex genomic rearrangement (CGR) hypothesized to result from replicative repair of DNA due to replication fork collapse. It is often mediated...
3.
Pendleton M, Moss M, Wu Q, Tempel R, Garcia R, Al-Dajani M
J Public Health Manag Pract
. 2023 Jun;
29(6):929-935.
PMID: 37290126
Objective: To describe the patterns of specific dental service utilization among the various sociodemographic groups in North Carolina served by the East Carolina University School of Dental Medicine (ECU SoDM)....
4.
Du H, Jolly A, Grochowski C, Yuan B, Dawood M, Jhangiani S, et al.
Genome Med
. 2022 Oct;
14(1):122.
PMID: 36303224
Background: The multiple de novo copy number variant (MdnCNV) phenotype is described by having four or more constitutional de novo CNVs (dnCNVs) arising independently throughout the human genome within one...
5.
Deshpande A, Ulahannan N, Pendleton M, Dai X, Ly L, Behr J, et al.
Nat Biotechnol
. 2022 May;
40(10):1488-1499.
PMID: 35637420
High-order three-dimensional (3D) interactions between more than two genomic loci are common in human chromatin, but their role in gene regulation is unclear. Previous high-order 3D chromatin assays either measure...
6.
Carvalho C, Coban-Akdemir Z, Hijazi H, Yuan B, Pendleton M, Harrington E, et al.
Genome Med
. 2019 Apr;
11(1):25.
PMID: 31014393
Background: Intrachromosomal triplications (TRP) can contribute to disease etiology via gene dosage effects, gene disruption, position effects, or fusion gene formation. Recently, post-zygotic de novo triplications adjacent to copy-number neutral...
7.
El-Shamy A, Pendleton M, Eng F, Doyle E, Bashir A, Branch A
Sci Rep
. 2016 Jun;
6:27025.
PMID: 27246310
Mutations at positions 70 and/or 91 in the core protein of genotype-1b, hepatitis C virus (HCV) are associated with hepatocellular carcinoma (HCC) risk in Asian patients. To evaluate this in...
8.
Sudmant P, Rausch T, Gardner E, Handsaker R, Abyzov A, Huddleston J, et al.
Nature
. 2015 Oct;
526(7571):75-81.
PMID: 26432246
Structural variants are implicated in numerous diseases and make up the majority of varying nucleotides among human genomes. Here we describe an integrated set of eight structural variant classes comprising...
9.
Pendleton M, Sebra R, Pang A, Ummat A, Franzen O, Rausch T, et al.
Nat Methods
. 2015 Jun;
12(8):780-6.
PMID: 26121404
We present the first comprehensive analysis of a diploid human genome that combines single-molecule sequencing with single-molecule genome maps. Our hybrid assembly markedly improves upon the contiguity observed from traditional...
10.
Smith C, Zhang C, Lin K, Lasater E, Zhang Y, Massi E, et al.
Cancer Discov
. 2015 Apr;
5(6):668-79.
PMID: 25847190
Unlabelled: Tyrosine kinase domain mutations are a common cause of acquired clinical resistance to tyrosine kinase inhibitors (TKI) used to treat cancer, including the FLT3 inhibitor quizartinib. Mutation of kinase...