Marek Cieplak
Overview
Explore the profile of Marek Cieplak including associated specialties, affiliations and a list of published articles.
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Articles
109
Citations
1100
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Recent Articles
1.
Pham D, Chwastyk M, Cieplak M
Front Chem
. 2023 Feb;
10:1106599.
PMID: 36760519
Cellular membraneless organelles are thought to be droplets formed within the two-phase region corresponding to proteinaceous systems endowed with the liquid-liquid transition. However, their metastability requires an additional constraint-they arise...
2.
Li M, Kloczkowski A, Cieplak M, Kouza M
Methods Mol Biol
. 2022 Feb;
2340:469-470.
PMID: 35167086
Aggregation of biomolecules is responsible for a number of neurodegenerative diseases, but it is also behind the formation of membraneless organelles that are vital to life. There are many novel...
3.
Cieplak M, Mioduszewski L, Chwastyk M
Methods Mol Biol
. 2022 Feb;
2340:105-120.
PMID: 35167072
We review the contact-based description of aggregation of intrinsically disordered proteins in coarse-grained and all-atom models. We consider polyglutamines and polyalanines at various concentrations of the peptides. We also study...
4.
Cieplak M, Travasso R
J Phys Condens Matter
. 2021 Nov;
34(3).
PMID: 34723836
No abstract available.
5.
Chwastyk M, Cieplak M
Front Mol Biosci
. 2021 Jun;
8:692230.
PMID: 34164435
We study the nascent behavior of three model coarse-grained proteins in six rigid all-atom structures representing ribosomes that come from three domains of life. The synthesis of the proteins is...
6.
Mioduszewski L, Cieplak M
PLoS Comput Biol
. 2021 Mar;
17(3):e1008840.
PMID: 33760823
Wheat (Triticum spp.) gluten consists mainly of intrinsincally disordered storage proteins (glutenins and gliadins) that can form megadalton-sized networks. These networks are responsible for the unique viscoelastic properties of wheat...
7.
Vera A, Galera-Prat A, Wojciechowski M, Rozycki B, Laurents D, Carrion-Vazquez M, et al.
Structure
. 2021 Feb;
29(6):587-597.e8.
PMID: 33561387
Cellulose is the most abundant organic molecule on Earth and represents a renewable and practically everlasting feedstock for the production of biofuels and chemicals. Self-assembled owing to the high-affinity cohesin-dockerin...
8.
Chwastyk M, Panek E, Malinowski J, Jaskolski M, Cieplak M
Front Mol Biosci
. 2020 Nov;
7:591381.
PMID: 33240933
We performed a PDB-wide survey of proteins to assess their cavity content, using the SPACEBALL algorithm to calculate the cavity volumes. In addition, we determined the hydropathy character of the...
9.
Cieplak M, Chwastyk M, Mioduszewski L, de Aquino B
Prog Mol Biol Transl Sci
. 2020 Aug;
174:79-103.
PMID: 32828471
We provide a brief overview of the topological features found in structured proteins and of the dynamical processes that involve knots. We then discuss the knotted states that arise in...
10.
Mykuliak V, Sikora M, Booth J, Cieplak M, Shalashilin D, Hytonen V
Biophys J
. 2020 Aug;
119(5):939-949.
PMID: 32822586
Mechanical signals regulate functions of mechanosensitive proteins by inducing structural changes that are determinant for force-dependent interactions. Talin is a focal adhesion protein that is known to extend under mechanical...