Logan Everett
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Explore the profile of Logan Everett including associated specialties, affiliations and a list of published articles.
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10
Citations
139
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Recent Articles
1.
OBrien J, Mitchell C, Auerbach S, Doonan L, Ewald J, Everett L, et al.
Toxicol Sci
. 2024 Nov;
203(2):147-159.
PMID: 39499193
There is a pressing need to increase the efficiency and reliability of toxicological safety assessment for protecting human health and the environment. Although conventional toxicology tests rely on measuring apical...
2.
Corton J, Matteo G, Chorley B, Liu J, Vallanat B, Everett L, et al.
Chem Biol Interact
. 2024 Apr;
394:110952.
PMID: 38570061
High throughput transcriptomics (HTTr) profiling has the potential to rapidly and comprehensively identify molecular targets of environmental chemicals that can be linked to adverse outcomes. We describe here the construction...
3.
Cocce K, Jasper J, Desautels T, Everett L, Wardell S, Westerling T, et al.
Cell Rep
. 2019 Oct;
29(4):889-903.e10.
PMID: 31644911
Notwithstanding the positive clinical impact of endocrine therapies in estrogen receptor-alpha (ERα)-positive breast cancer, de novo and acquired resistance limits the therapeutic lifespan of existing drugs. Taking the position that...
4.
Gabrawy M, Campbell S, Carbone M, Morozova T, Arya G, Turlapati L, et al.
J Gerontol A Biol Sci Med Sci
. 2019 Jun;
74(12):1844-1852.
PMID: 31197356
Physical resiliency declines with age and comorbid conditions. In humans, angiotensin-converting enzyme (ACE) has been associated with attenuation of the decline in physical performance with age. ACE-inhibitor compounds, commonly prescribed...
5.
Plasschaert R, Vigneau S, Tempera I, Gupta R, Maksimoska J, Everett L, et al.
Nucleic Acids Res
. 2013 Oct;
42(2):774-89.
PMID: 24121688
CTCF (CCCTC-binding factor) is a highly conserved multifunctional DNA-binding protein with thousands of binding sites genome-wide. Our previous work suggested that differences in CTCF's binding site sequence may affect the...
6.
Everett L, Hansen M, Hannenhalli S
Methods Mol Biol
. 2010 Sep;
674:297-312.
PMID: 20827600
Gene transcription is largely regulated by DNA-binding transcription factors (TFs). However, the TF activity itself is modulated via, among other things, post-translational modifications (PTMs) by specific modification enzymes in response...
7.
Hansen M, Everett L, Singh L, Hannenhalli S
Algorithms Mol Biol
. 2010 Jan;
5:4.
PMID: 20047660
Background: Functionally related genes tend to be correlated in their expression patterns across multiple conditions and/or tissue-types. Thus co-expression networks are often used to investigate functional groups of genes. In...
8.
Everett L, Vo A, Hannenhalli S
Nucleic Acids Res
. 2008 Oct;
37(Database issue):D66-71.
PMID: 18927104
Gene transcription is largely regulated by sequence-specific transcription factors (TFs). The TF activity is significantly regulated by its posttranslational modifications (PTMs). TF-PTMs serve as 'molecular switchboards' that map multiple upstream...
9.
Dunn J, McCorkle S, Everett L, Anderson C
Genet Eng (N Y)
. 2006 Dec;
28:159-73.
PMID: 17153938
Because paired-end genomic signature tags are sequenced-based, they have the potential to become an alternate tool to tiled microarray hybridization as a method for genome-wide localization of transcription factors and...
10.
Everett L, Wang L, Hannenhalli S
Bioinformatics
. 2006 Jul;
22(14):e117-23.
PMID: 16873461
Motivation: In a tri-partite biological network of transcription factors, their putative target genes, and the tissues in which the target genes are differentially expressed, a tightly inter-connected (dense) subgraph may...