Kevin P Keegan
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Explore the profile of Kevin P Keegan including associated specialties, affiliations and a list of published articles.
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18
Citations
1803
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0
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Recent Articles
1.
Arkin A, Cottingham R, Henry C, Harris N, Stevens R, Maslov S, et al.
Nat Biotechnol
. 2018 Jul;
36(7):566-569.
PMID: 29979655
No abstract available.
2.
Keegan K, Glass E, Meyer F
Methods Mol Biol
. 2016 Jan;
1399:207-33.
PMID: 26791506
Approaches in molecular biology, particularly those that deal with high-throughput sequencing of entire microbial communities (the field of metagenomics), are rapidly advancing our understanding of the composition and functional content...
3.
Kortman G, Dutilh B, Maathuis A, Engelke U, Boekhorst J, Keegan K, et al.
Front Microbiol
. 2016 Jan;
6:1481.
PMID: 26779139
Oral iron administration in African children can increase the risk for infections. However, it remains unclear to what extent supplementary iron affects the intestinal microbiome. We here explored the impact...
4.
Wilke A, Bischof J, Gerlach W, Glass E, Harrison T, Keegan K, et al.
Nucleic Acids Res
. 2015 Dec;
44(D1):D590-4.
PMID: 26656948
MG-RAST (http://metagenomics.anl.gov) is an open-submission data portal for processing, analyzing, sharing and disseminating metagenomic datasets. The system currently hosts over 200,000 datasets and is continuously updated. The volume of submissions...
5.
Brown B, LePrell R, Franklin R, Rivera M, Cabral F, Eaves H, et al.
Stand Genomic Sci
. 2015 Sep;
10:65.
PMID: 26388969
Knowledge of the diversity and ecological function of the microbial consortia of James River in Virginia, USA, is essential to developing a more complete understanding of the ecology of this...
6.
Claud E, Keegan K, Brulc J, Lu L, Bartels D, Glass E, et al.
Microbiome
. 2014 Jan;
1(1):20.
PMID: 24450928
Background: Preterm infants represent a unique patient population that is born functionally immature and must accomplish development under the influence of a hospital environment. Neonatal necrotizing enterocolitis (NEC) is an...
7.
Trimble W, Keegan K, DSouza M, Wilke A, Wilkening J, Gilbert J, et al.
BMC Bioinformatics
. 2012 Jul;
13:183.
PMID: 22839106
Background: Gene prediction algorithms (or gene callers) are an essential tool for analyzing shotgun nucleic acid sequence data. Gene prediction is a ubiquitous step in sequence analysis pipelines; it reduces...
8.
Keegan K, Trimble W, Wilkening J, Wilke A, Harrison T, DSouza M, et al.
PLoS Comput Biol
. 2012 Jun;
8(6):e1002541.
PMID: 22685393
We provide a novel method, DRISEE (duplicate read inferred sequencing error estimation), to assess sequencing quality (alternatively referred to as "noise" or "error") within and/or between sequencing samples. DRISEE provides...
9.
Larsen P, Collart F, Field D, Meyer F, Keegan K, Henry C, et al.
Microb Inform Exp
. 2012 May;
1(1):4.
PMID: 22587810
Background: The world's oceans are home to a diverse array of microbial life whose metabolic activity helps to drive the earth's biogeochemical cycles. Metagenomic analysis has revolutionized our access to...
10.
Delmont T, Prestat E, Keegan K, Faubladier M, Robe P, Clark I, et al.
ISME J
. 2012 Feb;
6(9):1677-87.
PMID: 22297556
The soil ecosystem is critical for human health, affecting aspects of the environment from key agricultural and edaphic parameters to critical influence on climate change. Soil has more unknown biodiversity...