Christopher S Henry
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Explore the profile of Christopher S Henry including associated specialties, affiliations and a list of published articles.
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77
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5117
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Recent Articles
1.
Song H, Ahamed F, Lee J, Henry C, Edirisinghe J, Nelson W, et al.
Sci Rep
. 2025 Feb;
15(1):6042.
PMID: 39972043
Integrating genome-scale metabolic networks with reactive transport models (RTMs) provides a detailed description of the dynamic changes in microbial growth and metabolism. Despite promising demonstrations in the past, computational inefficiency...
2.
Borton M, McGivern B, Willi K, Woodcroft B, Mosier A, Singleton D, et al.
Nature
. 2024 Nov;
637(8044):103-112.
PMID: 39567690
Predicting elemental cycles and maintaining water quality under increasing anthropogenic influence requires knowledge of the spatial drivers of river microbiomes. However, understanding of the core microbial processes governing river biogeochemistry...
3.
Cunha E, Lagoa D, Faria J, Liu F, Henry C, Dias O
Bioinformatics
. 2023 Aug;
39(8).
PMID: 37589572
Motivation: The importance and rate of development of genome-scale metabolic models have been growing for the last few years, increasing the demand for software solutions that automate several steps of...
4.
Borton M, McGivern B, Willi K, Woodcroft B, Mosier A, Singleton D, et al.
bioRxiv
. 2023 Jul;
PMID: 37502915
Predicting elemental cycles and maintaining water quality under increasing anthropogenic influence requires understanding the spatial drivers of river microbiomes. However, the unifying microbial processes governing river biogeochemistry are hindered by...
5.
Shaffer M, Borton M, Bolduc B, Faria J, Flynn R, Ghadermazi P, et al.
Bioinformatics
. 2023 Mar;
39(4).
PMID: 36857575
Availability And Implementation: For kb_DRAM users, the kb_DRAM apps on KBase can be found in the catalog at https://narrative.kbase.us/#catalog/modules/kb_DRAM. For kb_DRAM users, a tutorial workflow with all documentation is available...
6.
Heinken A, Hertel J, Acharya G, Ravcheev D, Nyga M, Okpala O, et al.
Nat Biotechnol
. 2023 Jan;
41(9):1320-1331.
PMID: 36658342
The human microbiome influences the efficacy and safety of a wide variety of commonly prescribed drugs. Designing precision medicine approaches that incorporate microbial metabolism would require strain- and molecule-resolved, scalable...
7.
Escudeiro P, Henry C, Dias R
Curr Res Microb Sci
. 2022 Dec;
3:100159.
PMID: 36561390
Eight-hundred thousand to one trillion prokaryotic species may inhabit our planet. Yet, fewer than two-hundred thousand prokaryotic species have been described. This uncharted fraction of microbial diversity, and its undisclosed...
8.
Bathe U, Leong B, Van Gelder K, Barbier G, Henry C, Amthor J, et al.
Plant Physiol
. 2022 Oct;
191(4):2093-2103.
PMID: 36271857
No abstract available.
9.
Haas D, Thamm A, Sun J, Huang L, Sun L, Beaudoin G, et al.
mBio
. 2022 Jul;
13(4):e0163022.
PMID: 35862786
Analysis of the genes retained in the minimized JCVI-Syn3A genome established that systems that repair or preempt metabolite damage are essential to life. Several genes known to have such functions...
10.
Beilsmith K, Henry C, Seaver S
Curr Opin Plant Biol
. 2022 Jun;
68:102244.
PMID: 35714443
Environmental challenges and development require plants to reallocate resources between primary and specialized metabolites to survive. Genome-scale metabolic models, which map carbon flux through metabolic pathways, are a valuable tool...