Jan Pieter Abrahams
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Explore the profile of Jan Pieter Abrahams including associated specialties, affiliations and a list of published articles.
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83
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1453
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Recent Articles
1.
Matinyan S, Filipcik P, Abrahams J
Acta Crystallogr A Found Adv
. 2024 Jan;
80(Pt 1):1-17.
PMID: 38189437
Deep learning techniques can recognize complex patterns in noisy, multidimensional data. In recent years, researchers have started to explore the potential of deep learning in the field of structural biology,...
2.
Matinyan S, Abrahams J
Acta Crystallogr A Found Adv
. 2023 Sep;
79(Pt 6):536-541.
PMID: 37743849
High-throughput data collection in crystallography poses significant challenges in handling massive amounts of data. Here, TERSE/PROLIX (or TRPX for short) is presented, a novel lossless compression algorithm specifically designed for...
3.
Matinyan S, Demir B, Filipcik P, Abrahams J, Van Genderen E
Acta Crystallogr A Found Adv
. 2023 Jun;
79(Pt 4):360-368.
PMID: 37338216
As an alternative approach to X-ray crystallography and single-particle cryo-electron microscopy, single-molecule electron diffraction has a better signal-to-noise ratio and the potential to increase the resolution of protein models. This...
4.
Fatton M, Filippidou S, Junier T, Cailleau G, Berge M, Poppleton D, et al.
Environ Microbiol
. 2022 Dec;
24(12):6320-6335.
PMID: 36530021
Endosporulation is a complex morphophysiological process resulting in a more resistant cellular structure that is produced within the mother cell and is called endospore. Endosporulation evolved in the common ancestor...
5.
Mohammed I, Schmitz K, Schenck N, Balasopoulos D, Topitsch A, Maier T, et al.
Structure
. 2022 Jul;
30(9):1254-1268.e7.
PMID: 35870450
The mitochondrial Lon protease (LonP1) regulates mitochondrial health by removing redundant proteins from the mitochondrial matrix. We determined LonP1 in eight nucleotide-dependent conformational states by cryoelectron microscopy (cryo-EM). The flexible...
6.
Wu J, Blum T, Farrell D, DiMaio F, Abrahams J, Luo J
Angew Chem Int Ed Engl
. 2021 May;
60(34):18680-18687.
PMID: 34042235
Amyloid-β peptide (Aβ) oligomers are pathogenic species of amyloid aggregates in Alzheimer's disease. Like certain protein toxins, Aβ oligomers permeabilize cellular membranes, presumably through a pore formation mechanism. Owing to...
7.
Xiao X, Willemse J, Voskamp P, Li X, Prota A, Lamers M, et al.
Open Biol
. 2021 Feb;
11(2):200409.
PMID: 33622102
In most bacteria, cell division begins with the polymerization of the GTPase FtsZ at mid-cell, which recruits the division machinery to initiate cell constriction. In the filamentous bacterium , cell...
8.
Blum T, Housset D, Clabbers M, Van Genderen E, Bacia-Verloop M, Zander U, et al.
Acta Crystallogr D Struct Biol
. 2021 Jan;
77(Pt 1):75-85.
PMID: 33404527
Electron diffraction allows protein structure determination when only nanosized crystals are available. Nevertheless, multiple elastic (or dynamical) scattering, which is prominent in electron diffraction, is a concern. Current methods for...
9.
Merg A, Touponse G, Van Genderen E, Blum T, Zuo X, Bazrafshan A, et al.
J Am Chem Soc
. 2020 Nov;
142(47):19956-19968.
PMID: 33170675
The fabrication of dynamic, transformable biomaterials that respond to environmental cues represents a significant step forward in the development of synthetic materials that rival their highly functional, natural counterparts. Here,...
10.
Xiao X, Elsayed S, Wu C, van der Heul H, Metsa-Ketela M, Du C, et al.
ACS Chem Biol
. 2020 Aug;
15(9):2529-2538.
PMID: 32840360
Angucyclines are a structurally diverse class of actinobacterial natural products defined by their varied polycyclic ring systems, which display a wide range of biological activities. We recently discovered lugdunomycin (),...