Istvan Ladunga
Overview
Explore the profile of Istvan Ladunga including associated specialties, affiliations and a list of published articles.
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22
Citations
1131
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Recent Articles
11.
Gonzalez M, Sealls W, Jesch E, Brosnan M, Ladunga I, Ding X, et al.
Physiol Genomics
. 2010 Nov;
43(3):121-35.
PMID: 21098682
Liver-specific ablation of cytochrome P450 reductase in mice (LCN) results in hepatic steatosis that can progress to steatohepatitis characterized by inflammation and fibrosis. The specific cause of the fatty liver...
12.
van Dijk K, Ding Y, Malkaram S, Riethoven J, Liu R, Yang J, et al.
BMC Plant Biol
. 2010 Nov;
10:238.
PMID: 21050490
Background: The molecular mechanisms of genome reprogramming during transcriptional responses to stress are associated with specific chromatin modifications. Available data, however, describe histone modifications only at individual plant genes induced...
13.
Belch Y, Yang J, Liu Y, Malkaram S, Liu R, Riethoven J, et al.
PLoS One
. 2010 Oct;
5(9):e12984.
PMID: 20886052
Background: Transcription is affected by nucleosomal resistance against polymerase passage. In turn, nucleosomal resistance is determined by DNA sequence, histone chaperones and remodeling enzymes. The contributions of these factors are...
14.
Jiao S, Bailey C, Zhang S, Ladunga I
Methods Mol Biol
. 2010 Sep;
674:161-77.
PMID: 20827591
Localizing the binding sites of regulatory proteins is becoming increasingly feasible and accurate. This is due to dramatic progress not only in chromatin immunoprecipitation combined by next-generation sequencing (ChIP-seq) but...
15.
Ladunga I
Methods Mol Biol
. 2010 Sep;
674:1-22.
PMID: 20827582
Here we provide a pragmatic, high-level overview of the computational approaches and tools for the discovery of transcription factor binding sites. Unraveling transcription regulatory networks and their malfunctions such as...
16.
Ladunga I
Curr Protoc Bioinformatics
. 2009 Jun;
Chapter 3:3.3.1-3.3.26.
PMID: 19496060
The Basic Local Alignment Search Tool (BLAST) is a keystone of bioinformatics due to its performance and user-friendliness. Beginner and intermediate users will learn how to design and submit blastn...
17.
Ladunga I
Curr Protoc Bioinformatics
. 2008 Sep;
Chapter 3:Unit 3.3.
PMID: 18792938
Basic Local Alignment Search Tool (BLAST) can identify possible homologs in nucleotide and protein databases with high sensitivity and selectivity, and at an amazing speed. Those homologs may provide inference...
18.
Wang Y, Ladunga I, Miller A, Horken K, Plucinak T, Weeks D, et al.
Genetics
. 2008 May;
179(1):177-92.
PMID: 18493050
The availability of the complete DNA sequence of the Chlamydomonas reinhardtii genome and advanced computational biology tools has allowed elucidation and study of the small ubiquitin-like modifier (SUMO) system in...
19.
Ladunga I
Curr Protoc Bioinformatics
. 2008 Apr;
Chapter 3:Unit 3.4.
PMID: 18428697
BLAST, Basic Local Alignment Search Tool is used more frequently than any other biosequence database search program. The purpose of this unit is not only to show how to run...
20.
Saleh A, Alvarez-Venegas R, Yilmaz M, Le O, Hou G, Sadder M, et al.
Plant Cell
. 2008 Apr;
20(3):568-79.
PMID: 18375658
Gene duplication followed by functional specialization is a potent force in the evolution of biological diversity. A comparative study of two highly conserved duplicated genes, ARABIDOPSIS TRITHORAX-LIKE PROTEIN1 (ATX1) and...