Chaitanya Rastogi
Overview
Explore the profile of Chaitanya Rastogi including associated specialties, affiliations and a list of published articles.
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Articles
15
Citations
403
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Recent Articles
1.
Gagoski D, Rube T, Rube H, Rastogi C, Melo L, Melo L, et al.
bioRxiv
. 2025 Jan;
PMID: 39764007
Short linear peptide motifs play important roles in cell signaling. They can act as modification sites for enzymes and as recognition sites for peptide binding domains. SH2 domains bind specifically...
2.
Trauernicht M, Filipovska T, Rastogi C, van Steensel B
Cell Syst
. 2024 Dec;
15(12):1107-1122.e7.
PMID: 39644900
In any given cell type, dozens of transcription factors (TFs) act in concert to control the activity of the genome by binding to specific DNA sequences in regulatory elements. Despite...
3.
Trauernicht M, Filipovska T, Rastogi C, van Steensel B
bioRxiv
. 2024 Aug;
PMID: 39091757
In any given cell type, dozens of transcription factors (TFs) act in concert to control the activity of the genome by binding to specific DNA sequences in regulatory elements. Despite...
4.
Trauernicht M, Rastogi C, Manzo S, Bussemaker H, van Steensel B
Nucleic Acids Res
. 2023 Aug;
51(18):9690-9702.
PMID: 37650627
TP53 is a transcription factor that controls multiple cellular processes, including cell cycle arrest, DNA repair and apoptosis. The relation between TP53 binding site architecture and transcriptional output is still...
5.
Feng S, Rastogi C, Loker R, Glassford W, Rube H, Bussemaker H, et al.
Nat Commun
. 2022 Jul;
13(1):3808.
PMID: 35778382
In eukaryotes, members of transcription factor families often exhibit similar DNA binding properties in vitro, yet orchestrate paralog-specific gene regulatory networks in vivo. The serially homologous first (T1) and third...
6.
Rube H, Rastogi C, Feng S, Kribelbauer J, Li A, Becerra B, et al.
Nat Biotechnol
. 2022 May;
40(10):1520-1527.
PMID: 35606422
Protein-ligand interactions are increasingly profiled at high throughput using affinity selection and massively parallel sequencing. However, these assays do not provide the biophysical parameters that most rigorously quantify molecular interactions....
7.
Kribelbauer J, Loker R, Feng S, Rastogi C, Abe N, Rube H, et al.
Mol Cell
. 2020 Feb;
78(1):152-167.e11.
PMID: 32053778
Eukaryotic transcription factors (TFs) form complexes with various partner proteins to recognize their genomic target sites. Yet, how the DNA sequence determines which TF complex forms at any given site...
8.
Sanchez-Higueras C, Rastogi C, Voutev R, Bussemaker H, Mann R, Hombria J
Nat Commun
. 2019 Aug;
10(1):3597.
PMID: 31399572
Hox proteins belong to a family of transcription factors with similar DNA binding specificities that control animal differentiation along the antero-posterior body axis. Hox proteins are expressed in partially overlapping...
9.
Kribelbauer J, Rastogi C, Bussemaker H, Mann R
Annu Rev Cell Dev Biol
. 2019 Jul;
35:357-379.
PMID: 31283382
Eukaryotic transcription factors (TFs) from the same structural family tend to bind similar DNA sequences, despite the ability of these TFs to execute distinct functions in vivo. The cell partly...
10.
Rastogi C, Rube H, Kribelbauer J, Crocker J, Loker R, Martini G, et al.
Proc Natl Acad Sci U S A
. 2018 Apr;
115(16):E3692-E3701.
PMID: 29610332
Transcription factors (TFs) control gene expression by binding to genomic DNA in a sequence-specific manner. Mutations in TF binding sites are increasingly found to be associated with human disease, yet...