Arun H Patil
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Explore the profile of Arun H Patil including associated specialties, affiliations and a list of published articles.
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40
Citations
1499
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Recent Articles
1.
Baran A, Patil A, Aparicio-Puerta E, Halushka M, McCall M
bioRxiv
. 2024 Jul;
PMID: 39071300
MicroRNA-seq data is produced by aligning small RNA sequencing reads of different miRNA transcript isoforms, called isomiRs, to known microRNAs. Aggregation to microRNA-level counts discards information and violates core assumptions...
2.
Nieuwenhuis T, Giles H, Arking J, Patil A, Shi W, McCall M, et al.
Lab Invest
. 2024 Apr;
104(6):102069.
PMID: 38670317
Tissue gene expression studies are impacted by biological and technical sources of variation, which can be broadly classified into wanted and unwanted variation. The latter, if not addressed, results in...
3.
Patil A, McCall M, Halushka M
NAR Genom Bioinform
. 2024 Jan;
6(1):lqad112.
PMID: 38213836
Altered open chromatin regions, impacting gene expression, is a feature of some human disorders. We discovered it is possible to detect global changes in genomically-related adjacent gene co-expression within single...
4.
Fromm B, Patil A, Halushka M
N Engl J Med
. 2022 Sep;
387(13):1240.
PMID: 36170510
No abstract available.
5.
Patil A, Baran A, Brehm Z, McCall M, Halushka M
Gigascience
. 2022 Aug;
11.
PMID: 36007182
Background: An incomplete picture of the expression distribution of microRNAs (miRNAs) across human cell types has long hindered our understanding of this important regulatory class of RNA. With the continued...
6.
Rex D, Patil A, Modi P, Kandiyil M, Kasaragod S, Pinto S, et al.
ACS Omega
. 2022 Mar;
7(10):8246-8257.
PMID: 35309442
Malaria is a vector-borne disease. It is caused by parasites. is a rodent model parasite, primarily used for studying parasite development in liver cells and vectors. To better understand parasite...
7.
Solanki H, Raja R, Zhavoronkov A, Ozerov I, Artemov A, Advani J, et al.
Oncoscience
. 2021 Sep;
8:108-109.
PMID: 34589558
[This corrects the article DOI: 10.18632/oncoscience.395.].
8.
Patil A, Halushka M
NAR Genom Bioinform
. 2021 Jul;
3(3):lqab068.
PMID: 34308351
MicroRNAs and tRFs are classes of small non-coding RNAs, known for their roles in translational regulation of genes. Advances in next-generation sequencing (NGS) have enabled high-throughput small RNA-seq studies, which...
9.
Deolankar S, Patil A, Rex D, Subba P, Mahadevan A, Prasad T
OMICS
. 2021 Jul;
25(8):525-536.
PMID: 34255573
Alzheimer's disease (AD) is a leading cause of dementia and a neurodegenerative disease. Proteomics and post-translational modification (PTM) analyses offer new opportunities for a comprehensive understanding of pathophysiology of brain...
10.
Verma R, Kannan S, Lin B, Fomchenko K, Nieuwenhuis T, Patil A, et al.
Skelet Muscle
. 2021 May;
11(1):13.
PMID: 34001262
Background: Skeletal muscle myofibers can be separated into functionally distinct cell types that differ in gene and protein expression. Current single cell expression data is generally based upon single nucleus...