Adib Shafi
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Explore the profile of Adib Shafi including associated specialties, affiliations and a list of published articles.
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Articles
15
Citations
251
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0
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Recent Articles
1.
Brochu H, Song K, Zhang Q, Zeng Q, Shafi A, Robinson M, et al.
Sci Rep
. 2024 Aug;
14(1):20249.
PMID: 39215120
The COVID-19 pandemic brought forth an urgent need for widespread genomic surveillance for rapid detection and monitoring of emerging SARS-CoV-2 variants. It necessitated design, development, and deployment of a nationwide...
2.
SARS-CoV-2 variant introduction following spring break travel and transmission mitigation strategies
Napolitano J, Srikanth S, Noorai R, Wilson S, Williams K, Rosales-Garcia R, et al.
PLoS One
. 2024 May;
19(5):e0301225.
PMID: 38722935
Background: University spring break carries a two-pronged SARS-CoV-2 variant transmission risk. Circulating variants from universities can spread to spring break destinations, and variants from spring break destinations can spread to...
3.
Tamakuwala S, Dean J, Kramer K, Shafi A, Ottum S, George J, et al.
J Med Educ Curric Dev
. 2021 Nov;
8:23821205211037444.
PMID: 34805529
Aim: The study aims to determine resident applicant metrics most predictive of academic and clinical performance as measured by the Council of Resident Education in Obstetrics and Gynecology (CREOG) examination...
4.
Ottum S, Chao C, Tamakuwala S, Dean J, Shafi A, Kramer K, et al.
Clin Exp Obstet Gynecol
. 2021 Nov;
48(5):1048-1055.
PMID: 34720368
Background: Multiple tools including Accreditation Council for Graduate Medical Education (ACGME) standardized milestones can be utilized to assess trainee and residency program performance. However, little is known regarding the objective...
5.
Runyan A, Welch R, Kramer K, Cortez S, Roberts L, Asamoah C, et al.
J Clin Med
. 2021 Apr;
10(9).
PMID: 33925203
Long-Acting Reversible Contraception (LARCs) has the potential to decrease unintended pregnancies but only if women can easily access a requested method. Retrospective electronic chart review identified women desiring LARC placement...
6.
Saberian N, Shafi A, Peyvandipour A, Draghici S
Sci Rep
. 2020 Jul;
10(1):12365.
PMID: 32703994
In spite of the efforts in developing and maintaining accurate variant databases, a large number of disease-associated variants are still hidden in the biomedical literature. Curation of the biomedical literature...
7.
Peyvandipour A, Shafi A, Saberian N, Draghici S
Sci Rep
. 2020 Jul;
10(1):12349.
PMID: 32703984
Single-cell RNA-seq (scRNASeq) has become a powerful technique for measuring the transcriptome of individual cells. Unlike the bulk measurements that average the gene expressions over the individual cells, gene measurements...
8.
Nguyen T, Shafi A, Nguyen T, Schissler A, Draghici S
Sci Rep
. 2020 Mar;
10(1):4188.
PMID: 32144346
With the explosion of high-throughput data, effective integrative analyses are needed to decipher the knowledge accumulated in biological databases. Existing meta-analysis approaches in systems biology often focus on hypothesis testing...
9.
Nguyen T, Shafi A, Nguyen T, Draghici S
Genome Biol
. 2019 Nov;
20(1):234.
PMID: 31718689
Following publication of the original paper [1], the authors reported the following update to the competing interests declaration.
10.
Nguyen T, Shafi A, Nguyen T, Draghici S
Genome Biol
. 2019 Oct;
20(1):203.
PMID: 31597578
Background: Many high-throughput experiments compare two phenotypes such as disease vs. healthy, with the goal of understanding the underlying biological phenomena characterizing the given phenotype. Because of the importance of...