Achchuthan Shanmugasundram
Overview
Explore the profile of Achchuthan Shanmugasundram including associated specialties, affiliations and a list of published articles.
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13
Citations
692
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Recent Articles
1.
Basenko E, Shanmugasundram A, Bohme U, Starns D, Wilkinson P, Davison H, et al.
Genetics
. 2024 Mar;
227(1).
PMID: 38529759
FungiDB (https://fungidb.org) serves as a valuable online resource that seamlessly integrates genomic and related large-scale data for a wide range of fungal and oomycete species. As an integral part of...
2.
Alvarez-Jarreta J, Amos B, Aurrecoechea C, Bah S, Barba M, Barreto A, et al.
Nucleic Acids Res
. 2023 Nov;
52(D1):D808-D816.
PMID: 37953350
The Eukaryotic Pathogen, Vector and Host Informatics Resource (VEuPathDB, https://veupathdb.org) is a Bioinformatics Resource Center funded by the National Institutes of Health with additional funding from the Wellcome Trust. VEuPathDB...
3.
Shanmugasundram A, Starns D, Bohme U, Amos B, Wilkinson P, Harb O, et al.
PLoS Negl Trop Dis
. 2023 Jan;
17(1):e0011058.
PMID: 36656904
Parasitic diseases caused by kinetoplastid parasites are a burden to public health throughout tropical and subtropical regions of the world. TriTrypDB (https://tritrypdb.org) is a free online resource for data mining...
4.
Amos B, Aurrecoechea C, Barba M, Barreto A, Basenko E, Bazant W, et al.
Nucleic Acids Res
. 2021 Oct;
50(D1):D898-D911.
PMID: 34718728
The Eukaryotic Pathogen, Vector and Host Informatics Resource (VEuPathDB, https://veupathdb.org) represents the 2019 merger of VectorBase with the EuPathDB projects. As a Bioinformatics Resource Center funded by the National Institutes...
5.
Warren W, Akopyants N, Dobson D, Hertz-Fowler C, Lye L, Myler P, et al.
Microbiol Resour Announc
. 2021 Sep;
10(35):e0054521.
PMID: 34472979
We report the high-quality draft assemblies and gene annotations for 13 species and/or strains of the protozoan parasite genera , , and , which span the phylogenetic diversity of the...
6.
Gossmann T, Shanmugasundram A, Borno S, Duvaux L, Lemaire C, Kuhl H, et al.
Curr Biol
. 2019 May;
29(10):1712-1720.e7.
PMID: 31080084
Some species responded successfully to prehistoric changes in climate [1, 2], while others failed to adapt and became extinct [3]. The factors that determine successful climate adaptation remain poorly understood....
7.
Basenko E, Pulman J, Shanmugasundram A, Harb O, Crouch K, Starns D, et al.
J Fungi (Basel)
. 2018 Aug;
4(1).
PMID: 30152809
FungiDB (fungidb.org) is a free online resource for data mining and functional genomics analysis for fungal and oomycete species. FungiDB is part of the Eukaryotic Pathogen Genomics Database Resource (EuPathDB,...
8.
Warrenfeltz S, Basenko E, Crouch K, Harb O, Kissinger J, Roos D, et al.
Methods Mol Biol
. 2018 May;
1757:69-113.
PMID: 29761457
Fighting infections and developing novel drugs and vaccines requires advanced knowledge of pathogen's biology. Readily accessible genomic, functional genomic, and population data aids biological and translational discovery. The Eukaryotic Pathogen...
9.
Mello L, Tregilgas L, Cowley G, Gupta A, Makki F, Jhutty A, et al.
High Educ Pedagog
. 2017 Nov;
2(1):43-57.
PMID: 29098185
Teaching bioinformatics is a longstanding challenge for educators who need to demonstrate to students how skills developed in the classroom may be applied to real world research. This study employed...
10.
Aurrecoechea C, Barreto A, Basenko E, Brestelli J, Brunk B, Cade S, et al.
Nucleic Acids Res
. 2016 Dec;
45(D1):D581-D591.
PMID: 27903906
The Eukaryotic Pathogen Genomics Database Resource (EuPathDB, http://eupathdb.org) is a collection of databases covering 170+ eukaryotic pathogens (protists & fungi), along with relevant free-living and non-pathogenic species, and select pathogen...