» Articles » PMID: 35694820

Optogenetic Actuator - ERK Biosensor Circuits Identify MAPK Network Nodes That Shape ERK dynamics

Overview
Journal Mol Syst Biol
Specialty Molecular Biology
Date 2022 Jun 13
PMID 35694820
Authors
Affiliations
Soon will be listed here.
Abstract

Combining single-cell measurements of ERK activity dynamics with perturbations provides insights into the MAPK network topology. We built circuits consisting of an optogenetic actuator to activate MAPK signaling and an ERK biosensor to measure single-cell ERK dynamics. This allowed us to conduct RNAi screens to investigate the role of 50 MAPK proteins in ERK dynamics. We found that the MAPK network is robust against most node perturbations. We observed that the ERK-RAF and the ERK-RSK2-SOS negative feedback operate simultaneously to regulate ERK dynamics. Bypassing the RSK2-mediated feedback, either by direct optogenetic activation of RAS, or by RSK2 perturbation, sensitized ERK dynamics to further perturbations. Similarly, targeting this feedback in a human ErbB2-dependent oncogenic signaling model increased the efficiency of a MEK inhibitor. The RSK2-mediated feedback is thus important for the ability of the MAPK network to produce consistent ERK outputs, and its perturbation can enhance the efficiency of MAPK inhibitors.

Citing Articles

Mathematical Modeling and Inference of Epidermal Growth Factor-Induced Mitogen-Activated Protein Kinase Cell Signaling Pathways.

Feng J, Zhang X, Tian T Int J Mol Sci. 2024; 25(18).

PMID: 39337687 PMC: 11432143. DOI: 10.3390/ijms251810204.


Oncogenic Kras induces spatiotemporally specific tissue deformation through converting pulsatile into sustained ERK activation.

Xin T, Gallini S, Wei H, Gonzalez D, Matte-Martone C, Machida H Nat Cell Biol. 2024; 26(6):859-867.

PMID: 38689013 PMC: 11519783. DOI: 10.1038/s41556-024-01413-y.


Deep model predictive control of gene expression in thousands of single cells.

Lugagne J, Blassick C, Dunlop M Nat Commun. 2024; 15(1):2148.

PMID: 38459057 PMC: 10923782. DOI: 10.1038/s41467-024-46361-1.


Optogenetic Regulation of EphA1 RTK Activation and Signaling.

Wurz A, Zheng K, Hughes R bioRxiv. 2024; .

PMID: 38370612 PMC: 10871282. DOI: 10.1101/2024.02.06.579139.


Light-inducible protein degradation in with the LOVdeg tag.

Tague N, Coriano-Ortiz C, Sheets M, Dunlop M Elife. 2024; 12.

PMID: 38270583 PMC: 10945698. DOI: 10.7554/eLife.87303.


References
1.
Yoo S, Cho S, Cho Y . Molecular Targeting of ERKs/RSK2 Signaling Axis in Cancer Prevention. J Cancer Prev. 2015; 20(3):165-71. PMC: 4597804. DOI: 10.15430/JCP.2015.20.3.165. View

2.
Patterson K, Brummer T, OBrien P, Daly R . Dual-specificity phosphatases: critical regulators with diverse cellular targets. Biochem J. 2009; 418(3):475-89. DOI: 10.1042/bj20082234. View

3.
Kholodenko B, Hancock J, Kolch W . Signalling ballet in space and time. Nat Rev Mol Cell Biol. 2010; 11(6):414-26. PMC: 2977972. DOI: 10.1038/nrm2901. View

4.
Shcherbakova D, Baloban M, Emelyanov A, Brenowitz M, Guo P, Verkhusha V . Bright monomeric near-infrared fluorescent proteins as tags and biosensors for multiscale imaging. Nat Commun. 2016; 7:12405. PMC: 4992171. DOI: 10.1038/ncomms12405. View

5.
Cullen P, Lockyer P . Integration of calcium and Ras signalling. Nat Rev Mol Cell Biol. 2002; 3(5):339-48. DOI: 10.1038/nrm808. View