» Articles » PMID: 33268788

Building Genomes to Understand Biology

Overview
Journal Nat Commun
Specialty Biology
Date 2020 Dec 3
PMID 33268788
Citations 15
Authors
Affiliations
Soon will be listed here.
Abstract

Genetic manipulation is one of the central strategies that biologists use to investigate the molecular underpinnings of life and its diversity. Thus, advances in genetic manipulation usually lead to a deeper understanding of biological systems. During the last decade, the construction of chromosomes, known as synthetic genomics, has emerged as a novel approach to genetic manipulation. By facilitating complex modifications to chromosome content and structure, synthetic genomics opens new opportunities for studying biology through genetic manipulation. Here, we discuss different classes of genetic manipulation that are enabled by synthetic genomics, as well as biological problems they each can help solve.

Citing Articles

Restructuring a Complex Genetic Function on Episomal Vectors in .

Bertelsen A, Ehrmann A, Bayer C, Batth T, Olsen J, Norholm M ACS Synth Biol. 2024; 14(1):161-170.

PMID: 39703023 PMC: 11745164. DOI: 10.1021/acssynbio.4c00533.


The de novo design and synthesis of yeast chromosome XIII facilitates investigations on aging.

Zhou C, Wang Y, Huang Y, An Y, Fu X, Yang D Nat Commun. 2024; 15(1):10139.

PMID: 39578428 PMC: 11584788. DOI: 10.1038/s41467-024-54130-3.


The design and engineering of synthetic genomes.

James J, Dai J, Chew W, Cai Y Nat Rev Genet. 2024; .

PMID: 39506144 DOI: 10.1038/s41576-024-00786-y.


: a near-minimal model organism for systems and synthetic biology.

Matteau D, Duval A, Baby V, Rodrigue S Front Genet. 2024; 15:1346707.

PMID: 38404664 PMC: 10884336. DOI: 10.3389/fgene.2024.1346707.


Building synthetic chromosomes from natural DNA.

Coradini A, Ville C, Krieger Z, Roemer J, Hull C, Yang S Nat Commun. 2023; 14(1):8337.

PMID: 38123566 PMC: 10733283. DOI: 10.1038/s41467-023-44112-2.


References
1.
Wang K, de la Torre D, Robertson W, Chin J . Programmed chromosome fission and fusion enable precise large-scale genome rearrangement and assembly. Science. 2019; 365(6456):922-926. PMC: 7056355. DOI: 10.1126/science.aay0737. View

2.
Elowitz M, Lim W . Build life to understand it. Nature. 2010; 468(7326):889-90. PMC: 3068207. DOI: 10.1038/468889a. View

3.
Sharp P, Matassi G . Codon usage and genome evolution. Curr Opin Genet Dev. 1994; 4(6):851-60. DOI: 10.1016/0959-437x(94)90070-1. View

4.
Richardson S, Mitchell L, Stracquadanio G, Yang K, Dymond J, DiCarlo J . Design of a synthetic yeast genome. Science. 2017; 355(6329):1040-1044. DOI: 10.1126/science.aaf4557. View

5.
Atwell S, Huang Y, Vilhjalmsson B, Willems G, Horton M, Li Y . Genome-wide association study of 107 phenotypes in Arabidopsis thaliana inbred lines. Nature. 2010; 465(7298):627-31. PMC: 3023908. DOI: 10.1038/nature08800. View