» Articles » PMID: 35387293

Synthetic Genomics From a Yeast Perspective

Overview
Date 2022 Apr 7
PMID 35387293
Authors
Affiliations
Soon will be listed here.
Abstract

Synthetic Genomics focuses on the construction of rationally designed chromosomes and genomes and offers novel approaches to study biology and to construct synthetic cell factories. Currently, progress in Synthetic Genomics is hindered by the inability to synthesize DNA molecules longer than a few hundred base pairs, while the size of the smallest genome of a self-replicating cell is several hundred thousand base pairs. Methods to assemble small fragments of DNA into large molecules are therefore required. Remarkably powerful at assembling DNA molecules, the unicellular eukaryote has been pivotal in the establishment of Synthetic Genomics. Instrumental in the assembly of entire genomes of various organisms in the past decade, the genome foundry has a key role to play in future Synthetic Genomics developments.

Citing Articles

Automation protocol for high-efficiency and high-quality genomic DNA extraction from Saccharomyces cerevisiae.

Alperovich N, Scott B, Ross D PLoS One. 2023; 18(10):e0292401.

PMID: 37847718 PMC: 10581484. DOI: 10.1371/journal.pone.0292401.


Cross-species microbial genome transfer: a Review.

Zhu M, Cui Y, Wang J, Xu H, Li B, Yuan Y Front Bioeng Biotechnol. 2023; 11:1183354.

PMID: 37214278 PMC: 10194841. DOI: 10.3389/fbioe.2023.1183354.

References
1.
Ostrov N, Beal J, Ellis T, Gordon D, Karas B, Lee H . Technological challenges and milestones for writing genomes. Science. 2019; 366(6463):310-312. DOI: 10.1126/science.aay0339. View

2.
Mutschler H, Robinson T, Tang T, Wegner S . Special Issue on Bottom-Up Synthetic Biology. Chembiochem. 2019; 20(20):2533-2534. DOI: 10.1002/cbic.201900507. View

3.
Mukai T, Yoneji T, Yamada K, Fujita H, Nara S, Suetsugu M . Overcoming the Challenges of Megabase-Sized Plasmid Construction in . ACS Synth Biol. 2020; 9(6):1315-1327. DOI: 10.1021/acssynbio.0c00008. View

4.
Karas B, Molparia B, Jablanovic J, Hermann W, Lin Y, Dupont C . Assembly of eukaryotic algal chromosomes in yeast. J Biol Eng. 2013; 7(1):30. PMC: 4029449. DOI: 10.1186/1754-1611-7-30. View

5.
Ruiz E, Talenton V, Dubrana M, Guesdon G, Lluch-Senar M, Salin F . CReasPy-Cloning: A Method for Simultaneous Cloning and Engineering of Megabase-Sized Genomes in Yeast Using the CRISPR-Cas9 System. ACS Synth Biol. 2019; 8(11):2547-2557. DOI: 10.1021/acssynbio.9b00224. View