Toward a Common Coordinate Framework for the Human Body

Overview

Journal Cell

Publisher Cell Press

Specialty Cell Biology

Date 2019 Dec 14

PMID 31835027

Citations 49

Authors

Jennifer E Rood

Tim Stuart

Shila Ghazanfar

Tommaso Biancalani

Eyal Fisher

Andrew Butler

Anna Hupalowska

Leslie Gaffney

William Mauck

Gokcen Eraslan

John C Marioni

Aviv Regev

Rahul Satija

Affiliations

Soon will be listed here.

Abstract

Understanding the genetic and molecular drivers of phenotypic heterogeneity across individuals is central to biology. As new technologies enable fine-grained and spatially resolved molecular profiling, we need new computational approaches to integrate data from the same organ across different individuals into a consistent reference and to construct maps of molecular and cellular organization at histological and anatomical scales. Here, we review previous efforts and discuss challenges involved in establishing such a common coordinate framework, the underlying map of tissues and organs. We focus on strategies to handle anatomical variation across individuals and highlight the need for new technologies and analytical methods spanning multiple hierarchical scales of spatial resolution.

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