» Articles » PMID: 22665476

Conserved Intergenic Elements and DNA Methylation Cooperate to Regulate Transcription at the Il17 Locus

Overview
Journal J Biol Chem
Specialty Biochemistry
Date 2012 Jun 6
PMID 22665476
Citations 32
Authors
Affiliations
Soon will be listed here.
Abstract

Naive CD4(+) T cells can differentiate into distinct lineages with unique immune functions. The cytokines TGFβ and IL-6 promote the development of Th17 cells that produce IL-17, an inflammatory cytokine not expressed by other T helper lineages. To further understand how IL-17 production is controlled, we studied an ~120-kb genomic region containing the murine il17a and il17f genes and seven evolutionarily conserved, intergenic noncoding sequences. We show that the +28-kb noncoding sequence cooperates with STAT3, RORγt, and Runx1 to enhance transcription from both il17a and il17f promoters. This enhancer and both promoters exhibited Th17 lineage-specific DNA demethylation, accompanied by demethylation of lysine 27 of histone H3 (H3K27) and increased H3K4 methylation. Loss of DNA methylation tended to occur at STAT3 consensus elements, and we show that methylation of one of these elements in the il17a promoter directly inhibits STAT3 binding and transcriptional activity. These results demonstrate that TGFβ and IL-6 synergize to epigenetically poise the il17 loci for expression in Th17 cells, and suggest a general mechanism by which active STAT3 may be epigenetically excluded from STAT3-responsive genes in non-Th17 lineages.

Citing Articles

Human CCR6+ Th Cells Show Both an Extended Stable Gradient of Th17 Activity and Imprinted Plasticity.

Singh S, Parween F, Edara N, Zhang H, Chen J, Otaizo-Carrasquero F J Immunol. 2023; 210(11):1700-1716.

PMID: 37093875 PMC: 10463241. DOI: 10.4049/jimmunol.2200874.


Human CCR6 Th cells show both an extended stable gradient of Th17 activity and imprinted plasticity.

Singh S, Parween F, Edara N, Zhang H, Chen J, Otaizo-Carrasquero F bioRxiv. 2023; .

PMID: 36789418 PMC: 9928045. DOI: 10.1101/2023.01.05.522630.


Profiling of epigenetic marker regions in murine ILCs under homeostatic and inflammatory conditions.

Beckstette M, Lu C, Herppich S, Diem E, Ntalli A, Ochel A J Exp Med. 2022; 219(10).

PMID: 35938981 PMC: 9386974. DOI: 10.1084/jem.20210663.


Role of CNSs Conserved Distal Cis-Regulatory Elements in CD4 + T Cell Development and Differentiation.

Long X, Luo C, Zhu Z Front Immunol. 2022; 13:919550.

PMID: 35812386 PMC: 9260786. DOI: 10.3389/fimmu.2022.919550.


Th17 cell master transcription factor RORC2 regulates HIV-1 gene expression and viral outgrowth.

Wiche Salinas T, Zhang Y, Sarnello D, Zhyvoloup A, Raymond Marchand L, Fert A Proc Natl Acad Sci U S A. 2021; 118(48).

PMID: 34819367 PMC: 8640723. DOI: 10.1073/pnas.2105927118.


References
1.
Yang X, Ghoreschi K, Steward-Tharp S, Rodriguez-Canales J, Zhu J, Grainger J . Opposing regulation of the locus encoding IL-17 through direct, reciprocal actions of STAT3 and STAT5. Nat Immunol. 2011; 12(3):247-54. PMC: 3182404. DOI: 10.1038/ni.1995. View

2.
Takizawa T, Nakashima K, Namihira M, Ochiai W, Uemura A, Yanagisawa M . DNA methylation is a critical cell-intrinsic determinant of astrocyte differentiation in the fetal brain. Dev Cell. 2001; 1(6):749-58. DOI: 10.1016/s1534-5807(01)00101-0. View

3.
Thomas R, Chunder N, Chen C, Umetsu S, Winandy S, Wells A . Ikaros enforces the costimulatory requirement for IL2 gene expression and is required for anergy induction in CD4+ T lymphocytes. J Immunol. 2007; 179(11):7305-15. DOI: 10.4049/jimmunol.179.11.7305. View

4.
Mukasa R, Balasubramani A, Lee Y, Whitley S, Weaver B, Shibata Y . Epigenetic instability of cytokine and transcription factor gene loci underlies plasticity of the T helper 17 cell lineage. Immunity. 2010; 32(5):616-27. PMC: 3129685. DOI: 10.1016/j.immuni.2010.04.016. View

5.
Bannister A, Kouzarides T . Regulation of chromatin by histone modifications. Cell Res. 2011; 21(3):381-95. PMC: 3193420. DOI: 10.1038/cr.2011.22. View