Pre-steady-state Kinetics for Hydrolysis of Insoluble Cellulose by Cellobiohydrolase Cel7A
Overview
Authors
Affiliations
The transient kinetic behavior of enzyme reactions prior to the establishment of steady state is a major source of mechanistic information, yet this approach has not been utilized for cellulases acting on their natural substrate, insoluble cellulose. Here, we elucidate the pre-steady-state regime for the exo-acting cellulase Cel7A using amperometric biosensors and an explicit model for processive hydrolysis of cellulose. This analysis allows the identification of a pseudo-steady-state period and quantification of a processivity number as well as rate constants for the formation of a threaded enzyme complex, processive hydrolysis, and dissociation, respectively. These kinetic parameters elucidate limiting factors in the cellulolytic process. We concluded, for example, that Cel7A cleaves about four glycosidic bonds/s during processive hydrolysis. However, the results suggest that stalling the processive movement and low off-rates result in a specific activity at pseudo-steady state that is 10-25-fold lower. It follows that the dissociation of the enzyme-substrate complex (half-time of ~30 s) is rate-limiting for the investigated system. We suggest that this approach can be useful in attempts to unveil fundamental reasons for the distinctive variability in hydrolytic activity found in different cellulase-substrate systems.
The Effect of Accessibility of Insoluble Substrate on the Overall Kinetics of Enzymatic Degradation.
Petrasek Z, Nidetzky B Biotechnol Bioeng. 2025; 122(4):895-907.
PMID: 39763056 PMC: 11895425. DOI: 10.1002/bit.28921.
Are cellulases slow? Kinetic and thermodynamic limitations for enzymatic breakdown of cellulose.
Westh P, Kari J, Badino S, Sorensen T, Christensen S, Rojel N BBA Adv. 2025; 7:100128.
PMID: 39758504 PMC: 11699605. DOI: 10.1016/j.bbadva.2024.100128.
Brunecky R, Knott B, Subramanian V, Linger J, Beckham G, Amore A J Biol Chem. 2024; 300(3):105749.
PMID: 38354778 PMC: 10943489. DOI: 10.1016/j.jbc.2024.105749.
Impact of Synergy Partner Cel7B on Cel7A Binding Rates: Insights from Single-Molecule Data.
Nousi A, Molina G, Schiano-di-Cola C, Sorensen T, Borch K, Pedersen J J Phys Chem B. 2024; 128(3):635-647.
PMID: 38227769 PMC: 10824242. DOI: 10.1021/acs.jpcb.3c05697.
Petrasek Z, Nidetzky B J Phys Chem B. 2022; 126(42):8472-8485.
PMID: 36251767 PMC: 9623590. DOI: 10.1021/acs.jpcb.2c05956.