» Articles » PMID: 22493488

Pre-steady-state Kinetics for Hydrolysis of Insoluble Cellulose by Cellobiohydrolase Cel7A

Overview
Journal J Biol Chem
Specialty Biochemistry
Date 2012 Apr 12
PMID 22493488
Citations 42
Authors
Affiliations
Soon will be listed here.
Abstract

The transient kinetic behavior of enzyme reactions prior to the establishment of steady state is a major source of mechanistic information, yet this approach has not been utilized for cellulases acting on their natural substrate, insoluble cellulose. Here, we elucidate the pre-steady-state regime for the exo-acting cellulase Cel7A using amperometric biosensors and an explicit model for processive hydrolysis of cellulose. This analysis allows the identification of a pseudo-steady-state period and quantification of a processivity number as well as rate constants for the formation of a threaded enzyme complex, processive hydrolysis, and dissociation, respectively. These kinetic parameters elucidate limiting factors in the cellulolytic process. We concluded, for example, that Cel7A cleaves about four glycosidic bonds/s during processive hydrolysis. However, the results suggest that stalling the processive movement and low off-rates result in a specific activity at pseudo-steady state that is 10-25-fold lower. It follows that the dissociation of the enzyme-substrate complex (half-time of ~30 s) is rate-limiting for the investigated system. We suggest that this approach can be useful in attempts to unveil fundamental reasons for the distinctive variability in hydrolytic activity found in different cellulase-substrate systems.

Citing Articles

The Effect of Accessibility of Insoluble Substrate on the Overall Kinetics of Enzymatic Degradation.

Petrasek Z, Nidetzky B Biotechnol Bioeng. 2025; 122(4):895-907.

PMID: 39763056 PMC: 11895425. DOI: 10.1002/bit.28921.


Are cellulases slow? Kinetic and thermodynamic limitations for enzymatic breakdown of cellulose.

Westh P, Kari J, Badino S, Sorensen T, Christensen S, Rojel N BBA Adv. 2025; 7:100128.

PMID: 39758504 PMC: 11699605. DOI: 10.1016/j.bbadva.2024.100128.


Engineering of glycoside hydrolase family 7 cellobiohydrolases directed by natural diversity screening.

Brunecky R, Knott B, Subramanian V, Linger J, Beckham G, Amore A J Biol Chem. 2024; 300(3):105749.

PMID: 38354778 PMC: 10943489. DOI: 10.1016/j.jbc.2024.105749.


Impact of Synergy Partner Cel7B on Cel7A Binding Rates: Insights from Single-Molecule Data.

Nousi A, Molina G, Schiano-di-Cola C, Sorensen T, Borch K, Pedersen J J Phys Chem B. 2024; 128(3):635-647.

PMID: 38227769 PMC: 10824242. DOI: 10.1021/acs.jpcb.3c05697.


Model of Processive Catalysis with Site Clustering and Blocking and Its Application to Cellulose Hydrolysis.

Petrasek Z, Nidetzky B J Phys Chem B. 2022; 126(42):8472-8485.

PMID: 36251767 PMC: 9623590. DOI: 10.1021/acs.jpcb.2c05956.


References
1.
Nidetzky B, Steiner W, Claeyssens M . Cellulose hydrolysis by the cellulases from Trichoderma reesei: adsorptions of two cellobiohydrolases, two endocellulases and their core proteins on filter paper and their relation to hydrolysis. Biochem J. 1994; 303 ( Pt 3):817-23. PMC: 1137620. DOI: 10.1042/bj3030817. View

2.
Zhang Y, Lynd L . Toward an aggregated understanding of enzymatic hydrolysis of cellulose: noncomplexed cellulase systems. Biotechnol Bioeng. 2004; 88(7):797-824. DOI: 10.1002/bit.20282. View

3.
Praestgaard E, Elmerdahl J, Murphy L, Nymand S, McFarland K, Borch K . A kinetic model for the burst phase of processive cellulases. FEBS J. 2011; 278(9):1547-60. DOI: 10.1111/j.1742-4658.2011.08078.x. View

4.
MEDVE J, Karlsson J, Lee D, Tjerneld F . Hydrolysis of microcrystalline cellulose by cellobiohydrolase I and endoglucanase II from Trichoderma reesei: adsorption, sugar production pattern, and synergism of the enzymes. Biotechnol Bioeng. 1999; 59(5):621-34. View

5.
Tatsumi H, Katano H, Ikeda T . Kinetic analysis of enzymatic hydrolysis of crystalline cellulose by cellobiohydrolase using an amperometric biosensor. Anal Biochem. 2006; 357(2):257-61. DOI: 10.1016/j.ab.2006.07.019. View