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Ribosomal Peptide Natural Products: Bridging the Ribosomal and Nonribosomal Worlds

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Journal Nat Prod Rep
Date 2009 Aug 1
PMID 19642421
Citations 115
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Abstract

Ribosomally synthesized bacterial natural products rival the nonribosomal peptides in their structural and functional diversity. The last decade has seen substantial progress in the identification and characterization of biosynthetic pathways leading to ribosomal peptide natural products with new and unusual structural motifs. In some of these cases, the motifs are similar to those found in nonribosomal peptides, and many are constructed by convergent or even paralogous enzymes. Here, we summarize the major structural and biosynthetic categories of ribosomally synthesized bacterial natural products and, where applicable, compare them to their homologs from nonribosomal biosynthesis.

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References
1.
Trabi M, Schirra H, Craik D . Three-dimensional structure of RTD-1, a cyclic antimicrobial defensin from Rhesus macaque leukocytes. Biochemistry. 2001; 40(14):4211-21. DOI: 10.1021/bi002028t. View

2.
Hayakawa Y, Sasaki K, Nagai K, Shin-Ya K, Furihata K . Structure of thioviridamide, a novel apoptosis inducer from Streptomyces olivoviridis. J Antibiot (Tokyo). 2006; 59(1):6-10. DOI: 10.1038/ja.2006.2. View

3.
Gillor O, Kirkup B, Riley M . Colicins and microcins: the next generation antimicrobials. Adv Appl Microbiol. 2004; 54:129-46. DOI: 10.1016/S0065-2164(04)54005-4. View

4.
Tanovic A, Samel S, Essen L, Marahiel M . Crystal structure of the termination module of a nonribosomal peptide synthetase. Science. 2008; 321(5889):659-63. DOI: 10.1126/science.1159850. View

5.
Unkefer C, Houck D, Britt B, Sosnick T, Hanners J . Biogenesis of pyrroloquinoline quinone from 3C-labeled tyrosine. Methods Enzymol. 1995; 258:227-35. DOI: 10.1016/0076-6879(95)58049-2. View