Zinc Finger Nucleases: Custom-designed Molecular Scissors for Genome Engineering of Plant and Mammalian Cells
Overview
Authors
Affiliations
Custom-designed zinc finger nucleases (ZFNs), proteins designed to cut at specific DNA sequences, are becoming powerful tools in gene targeting--the process of replacing a gene within a genome by homologous recombination (HR). ZFNs that combine the non-specific cleavage domain (N) of FokI endonuclease with zinc finger proteins (ZFPs) offer a general way to deliver a site-specific double-strand break (DSB) to the genome. The development of ZFN-mediated gene targeting provides molecular biologists with the ability to site-specifically and permanently modify plant and mammalian genomes including the human genome via homology-directed repair of a targeted genomic DSB. The creation of designer ZFNs that cleave DNA at a pre-determined site depends on the reliable creation of ZFPs that can specifically recognize the chosen target site within a genome. The (Cys2His2) ZFPs offer the best framework for developing custom ZFN molecules with new sequence-specificities. Here, we explore the different approaches for generating the desired custom ZFNs with high sequence-specificity and affinity. We also discuss the potential of ZFN-mediated gene targeting for 'directed mutagenesis' and targeted 'gene editing' of the plant and mammalian genome as well as the potential of ZFN-based strategies as a form of gene therapy for human therapeutics in the future.
Advancements in genome editing tools for genetic studies and crop improvement.
Ahmadikhah A, Zarabizadeh H, Nayeri S, Abbasi M Front Plant Sci. 2025; 15:1370675.
PMID: 39963359 PMC: 11830681. DOI: 10.3389/fpls.2024.1370675.
Ryu M, Yurube T, Takeoka Y, Kanda Y, Tsujimoto T, Miyazaki K Cells. 2024; 13(23).
PMID: 39682777 PMC: 11640589. DOI: 10.3390/cells13232030.
Borah A, Singh S, Chattopadhyay R, Kaur J, Bari V Funct Integr Genomics. 2024; 24(6):207.
PMID: 39496976 DOI: 10.1007/s10142-024-01486-w.
Allogeneic CAR-T cells for cancer immunotherapy.
Chen X, Gao Y, Zhang Y Immunotherapy. 2024; 16(16-17):1079-1090.
PMID: 39378059 PMC: 11492692. DOI: 10.1080/1750743X.2024.2408048.
Systematic discovery of DNA-binding tandem repeat proteins.
Hu X, Zhang X, Sun W, Liu C, Deng P, Cao Y Nucleic Acids Res. 2024; 52(17):10464-10489.
PMID: 39189466 PMC: 11417379. DOI: 10.1093/nar/gkae710.