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Physical and Functional Interaction of the Archaeal Single-stranded DNA-binding Protein SSB with RNA Polymerase

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Specialty Biochemistry
Date 2004 Feb 12
PMID 14872062
Citations 26
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Abstract

Archaeal transcription utilizes a complex multisubunit RNA polymerase and the basal transcription factors TBP and TF(II)B, closely resembling its eukaryal counterpart. We have uncovered a tight physical and functional interaction between RNA polymerase and the single-stranded DNA-binding protein SSB in Sulfolobus solfataricus. SSB stimulates transcription from promoters in vitro under TBP-limiting conditions and supports transcription in the absence of TBP. SSB also rescues transcription from repression by reconstituted chromatin. We demonstrate the potential for promoter melting by SSB, suggesting a plausible basis for the stimulation of transcription. This stimulation requires both the single-stranded DNA-binding domain and the acidic C-terminal tail of the SSB. The tail forms a stable interaction with RNA polymerase. These data reveal an unexpected role for single-stranded DNA-binding proteins in transcription in archaea.

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References
1.
Bell S, Kosa P, SIGLER P, Jackson S . Orientation of the transcription preinitiation complex in archaea. Proc Natl Acad Sci U S A. 1999; 96(24):13662-7. PMC: 24121. DOI: 10.1073/pnas.96.24.13662. View

2.
Sandman K, Reeve J . Structure and functional relationships of archaeal and eukaryal histones and nucleosomes. Arch Microbiol. 2000; 173(3):165-9. DOI: 10.1007/s002039900122. View

3.
Bell S, Jackson S . The role of transcription factor B in transcription initiation and promoter clearance in the archaeon Sulfolobus acidocaldarius. J Biol Chem. 2000; 275(17):12934-40. DOI: 10.1074/jbc.275.17.12934. View

4.
Genschel J, Curth U, Urbanke C . Interaction of E. coli single-stranded DNA binding protein (SSB) with exonuclease I. The carboxy-terminus of SSB is the recognition site for the nuclease. Biol Chem. 2000; 381(3):183-92. DOI: 10.1515/BC.2000.025. View

5.
Bartlett M, Thomm M, Geiduschek E . The orientation of DNA in an archaeal transcription initiation complex. Nat Struct Biol. 2000; 7(9):782-5. DOI: 10.1038/79020. View