» Articles » PMID: 12791864

Evaluation of Repetitive Element Sequence-based PCR As a Molecular Typing Method for Clostridium Difficile

Overview
Specialty Microbiology
Date 2003 Jun 7
PMID 12791864
Citations 11
Authors
Affiliations
Soon will be listed here.
Abstract

Repetitive element sequence-based PCR (rep-PCR) is a typing method that enables the generation of DNA fingerprinting that discriminates bacterial strains. In this study, we evaluated the applicability of rep-PCR in typing Clostridium difficile clinical isolates. The results obtained by rep-PCR were compared with those obtained by pulsed-field gel electrophoresis (PFGE) and PCR ribotyping. A high correspondence between pattern differentiations produced by rep-PCR and PFGE was observed, whereas PCR ribotyping showed a lower level of discriminatory power.

Citing Articles

Genetic Diversity and Population Structure of Phyllosphere-Associated Xanthomonas euvesicatoria Bacteria in Physalis pubescens Based on BOX-PCR and ERIC-PCR in China.

Siddique F, Xiaofeng X, Zhe N, Mingxiu Y, Dawei L, Yuting L Plant Pathol J. 2025; 41(1):64-77.

PMID: 39916416 PMC: 11834500. DOI: 10.5423/PPJ.OA.09.2024.0138.


Lactic acid bacteria as an eco-friendly approach in plant production: Current state and prospects.

Lahmamsi H, Ananou S, Lahlali R, Tahiri A Folia Microbiol (Praha). 2024; 69(3):465-489.

PMID: 38393576 DOI: 10.1007/s12223-024-01146-3.


Identification and Correlation of and in Caries-active and Caries-free Children: A PCR Study.

Thimmegowda U, Belagatta V, Chikkanarasaiah N, Bilichodmath S Int J Clin Pediatr Dent. 2023; 16(1):9-15.

PMID: 37020765 PMC: 10068000. DOI: 10.5005/jp-journals-10005-2512.


Virulence Characteristics of Biofilm-Forming in Clinical Isolates Using a Model.

Khalil M, Ahmed F, Elkhateeb A, Mahmoud E, Ahmed M, Ahmed R Microorganisms. 2021; 9(11).

PMID: 34835490 PMC: 8625498. DOI: 10.3390/microorganisms9112365.


A Comparison of Molecular Typing Methods Applied to complex: Sequencing, Rep-PCR, and MLST.

Viau R, Kiedrowski L, Kreiswirth B, Adams M, Perez F, Marchaim D Pathog Immun. 2017; 2(1):23-33.

PMID: 28428984 PMC: 5394936. DOI: 10.20411/pai.v2i1.99.


References
1.
Stern M, AMES G, Smith N, Robinson E, Higgins C . Repetitive extragenic palindromic sequences: a major component of the bacterial genome. Cell. 1984; 37(3):1015-26. DOI: 10.1016/0092-8674(84)90436-7. View

2.
Spigaglia P, Cardines R, Rossi S, Menozzi M, Mastrantonio P . Molecular typing and long-term comparison of clostridium difficile strains by pulsed-field gel electrophoresis and PCR-ribotyping. J Med Microbiol. 2001; 50(5):407-414. DOI: 10.1099/0022-1317-50-5-407. View

3.
McFarland L, Mulligan M, Kwok R, Stamm W . Nosocomial acquisition of Clostridium difficile infection. N Engl J Med. 1989; 320(4):204-10. DOI: 10.1056/NEJM198901263200402. View

4.
Johnson S, Clabots C, LINN F, Olson M, Peterson L, Gerding D . Nosocomial Clostridium difficile colonisation and disease. Lancet. 1990; 336(8707):97-100. DOI: 10.1016/0140-6736(90)91605-a. View

5.
Alves A, Santos O, Henriques I, Correia A . Evaluation of methods for molecular typing and identification of members of the genus Brevibacterium and other related species. FEMS Microbiol Lett. 2002; 213(2):205-11. DOI: 10.1111/j.1574-6968.2002.tb11307.x. View