Journal of Open Source Software
Overview
Journal of Open Source Software is a scientific journal, published since 2016 in English. The journal's country of origin is United States.
Details
Details
Abbr.
J Open Source Softw
Start
2016
End
Continuing
Frequency
Monthly
e-ISSN
2475-9066
Country
United States
Language
English
Recent Articles
1.
Sportiello M, Topham D
J Open Source Softw
. 2025 Mar;
9(98).
PMID: 40051905
With the advent of gene editing playing a regular role in producing new experimental models, the need to get the appropriate allele at each respective locus in a model organism...
2.
Tiegs J, Raykin J, Rochlin I
J Open Source Softw
. 2025 Feb;
10(105).
PMID: 39995849
BART-Survival is a Python package that allows time-to-event (survival) analyses in discrete-time using the non-parametric machine learning algorithm, Bayesian Additive Regression Trees (BART). BART-Survival combines the performance of the BART...
3.
Bousquin J, Mullin C
J Open Source Softw
. 2025 Jan;
9(102):7305.
PMID: 39759583
No abstract available.
4.
Luo L, Wu W, Taylor J, Kang J, Kleinsasser M, He K
J Open Source Softw
. 2024 Dec;
9(98).
PMID: 39717690
The surtvep package is an open-source software designed for estimating time-varying effects in survival analysis using the Cox non-proportional hazards model in R. With the rapid increase in large-scale time-to-event...
5.
Wirth J, Katz L, Williams G, Chen J
J Open Source Softw
. 2024 Dec;
9(101).
PMID: 39624182
In both molecular epidemiology and microbial ecology, it is useful to be able to categorize specific strains of microorganisms in either an ingroup or an outgroup in a given population,...
6.
Halchenko Y, Meyer K, Poldrack B, Solanky D, Wagner A, Gors J, et al.
J Open Source Softw
. 2024 Oct;
6(63).
PMID: 39469147
DataLad is a Python-based tool for the joint management of code, data, and their relationship, built on top of a versatile system for data logistics (git-annex) and the most popular...
7.
Schodt D, Wester M, Fazel M, Khan S, Mazloom-Farsibaf H, Pallikkuth S, et al.
J Open Source Softw
. 2024 Oct;
8(90).
PMID: 39372265
Fluorescence single molecule imaging comprises a variety of techniques that involve detecting individual fluorescent molecules. Many of these techniques involve localizing individual fluorescent molecules with precisions below the diffraction limit,...
8.
Halchenko Y, Goncalves M, Ghosh S, Velasco P, Visconti di Oleggio Castello M, Salo T, et al.
J Open Source Softw
. 2024 Sep;
9(99).
PMID: 39323511
No abstract available.
9.
Galassi A, Norgaard M, Thomas A, Gonzalez-Escamilla G, Svarer C, Rorden C, et al.
J Open Source Softw
. 2024 Sep;
9(100).
PMID: 39309688
No abstract available.
10.
Katz L, Phan J, Den Bakker H
J Open Source Softw
. 2024 Sep;
9(94):6030.
PMID: 39234029
No abstract available.