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Computational Systems Bioinformatics

Computational Systems Bioinformatics is a scientific journal, published since 2006 in English. The journal's country of origin is United States and its primary focus area is biology.

Details
Abbr. Comput Syst Bioinformatics Conf
Start 2006
End 2010
Frequency Annual
p-ISSN 1752-7791
e-ISSN 1942-454X
Country United States
Language English
Specialty Biology
Recent Articles
1.
Pokhriyal N, Ponts N, Harris E, Le Roch K, Lonardi S
Comput Syst Bioinformatics Conf . 2014 Aug; 9:124-135. PMID: 25076982
Recent genome-wide studies on nucleosome positioning in model organisms have shown strong evidence that nucleosome landscapes in the proximity of protein-coding genes exhibit regular characteristic patterns. Here, we propose a...
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3.
Smalter A, Huan J, Lushington G
Comput Syst Bioinformatics Conf . 2009 Aug; 7:327-38. PMID: 19642292
In this paper we introduce a novel graph classification algorithm and demonstrate its efficacy in drug design. In our method, we use graphs to model chemical structures and apply a...
4.
Smith A, Craven M
Comput Syst Bioinformatics Conf . 2009 Aug; 7:315-26. PMID: 19642291
We present two heuristics for speeding up a time series alignment algorithm that is related to dynamic time warping (DTW). In previous work, we developed our multisegment alignment algorithm to...
5.
Ahmed W
Comput Syst Bioinformatics Conf . 2009 Aug; 7:311-4. PMID: 19642290
Biological and pharmaceutical research relies heavily on microscopically imaging cell populations for understanding their structure and function. Much work has been done on automated analysis of biological images, but image...
6.
Li X, Li J
Comput Syst Bioinformatics Conf . 2009 Aug; 7:297-308. PMID: 19642289
We study the haplotype inference problem from pedigree data under the zero recombination assumption, which is well supported by real data for tightly linked markers (i.e., single nucleotide polymorphisms (SNPs))...
7.
Wu Y, Close T, Lonardi S
Comput Syst Bioinformatics Conf . 2009 Aug; 7:285-96. PMID: 19642288
We study the problem of merging genetic maps, when the individual genetic maps are given as directed acyclic graphs. The problem is to build a consensus map, which includes and...
8.
Sheikh S, Berger-Wolf T, Ashley M, Caballero I, Chaovalitwongse W, Dasgupta B
Comput Syst Bioinformatics Conf . 2009 Aug; 7:273-84. PMID: 19642287
Kinship analysis using genetic data is important for many biological applications, including many in conservation biology. Wide availability of microsatellites has boosted studies in wild populations that rely on the...
9.
Zheng C, Wall P, Leebens-Mack J, Albert V, dePamphilis C, Sankoff D
Comput Syst Bioinformatics Conf . 2009 Aug; 7:261-71. PMID: 19642286
We improve on guided genome halving algorithms so that several thousand gene sets, each containing two paralogs in the descendant T of the doubling event and their single ortholog from...
10.
Ulitsky I, Shamir R
Comput Syst Bioinformatics Conf . 2009 Aug; 7:249-58. PMID: 19642285
The recent explosion in the number of clinical studies involving microarray data calls for novel computational methods for their dissection. Human protein interaction networks are rapidly growing and can assist...