Algorithms for Molecular Biology : Amb
Overview
Algorithms for Molecular Biology : Amb is a scientific journal, published by Biomed Central since 2006 in English. The journal's country of origin is United Kingdom.
Details
Details
Abbr.
Algorithms Mol Biol
Publisher
Biomed Central
Start
2006
End
Continuing
e-ISSN
1748-7188
Country
United Kingdom
Language
English
Metrics
Metrics
h-index / Ranks: 8709
40
SJR / Ranks: 6853
654
CiteScore / Ranks: 8019
3.30
JIF / Ranks: 6819
1.0
Recent Articles
31.
Han Y, Molloy E
Algorithms Mol Biol
. 2023 Dec;
18(1):19.
PMID: 38041123
Cancer progression and treatment can be informed by reconstructing its evolutionary history from tumor cells. Although many methods exist to estimate evolutionary trees (called phylogenies) from molecular sequences, traditional approaches...
32.
Ozeri E, Zehavi M, Ziv-Ukelson M
Algorithms Mol Biol
. 2023 Dec;
18(1):17.
PMID: 38037088
We define two new computational problems in the domain of perfect genome rearrangements, and propose three algorithms to solve them. The rearrangement scenarios modeled by the problems consider Reversal and...
33.
Schaller D, Hartmann T, Lafond M, Stadler P, Wieseke N, Hellmuth M
Algorithms Mol Biol
. 2023 Nov;
18(1):16.
PMID: 37940998
Background: Evolutionary scenarios describing the evolution of a family of genes within a collection of species comprise the mapping of the vertices of a gene tree T to vertices and...
34.
Bonnet K, Marschall T, Doerr D
Algorithms Mol Biol
. 2023 Sep;
18(1):15.
PMID: 37775806
Homologous recombination between the maternal and paternal copies of a chromosome is a key mechanism for human inheritance and shapes population genetic properties of our species. However, a similar mechanism...
35.
Rubert D, Braga M
Algorithms Mol Biol
. 2023 Sep;
18(1):14.
PMID: 37770945
Background: Recently we developed a gene orthology inference tool based on genome rearrangements (Journal of Bioinformatics and Computational Biology 19:6, 2021). Given a set of genomes our method first computes...
36.
Bernardini G, van Iersel L, Julien E, Stougie L
Algorithms Mol Biol
. 2023 Sep;
18(1):13.
PMID: 37717003
Background: Combining a set of phylogenetic trees into a single phylogenetic network that explains all of them is a fundamental challenge in evolutionary studies. Existing methods are computationally expensive and...
37.
Jin Y, Terhorst J
Algorithms Mol Biol
. 2023 Aug;
18(1):12.
PMID: 37559098
The Li-Stephens (LS) haplotype copying model forms the basis of a number of important statistical inference procedures in genetics. LS is a probabilistic generative model which supposes that a sampled...
38.
Guerrini V, Conte A, Grossi R, Liti G, Rosone G, Tattini L
Algorithms Mol Biol
. 2023 Aug;
18(1):11.
PMID: 37537624
Background: Molecular phylogenetics studies the evolutionary relationships among the individuals of a population through their biological sequences. It may provide insights about the origin and the evolution of viral diseases,...
39.
Jun S, Nasif H, Jennings-Shaffer C, Rich D, Kooperberg A, Fourment M, et al.
Algorithms Mol Biol
. 2023 Jul;
18(1):10.
PMID: 37525243
Bayesian phylogenetics is a computationally challenging inferential problem. Classical methods are based on random-walk Markov chain Monte Carlo (MCMC), where random proposals are made on the tree parameter and the...
40.
Gascon M, El-Mabrouk N
Algorithms Mol Biol
. 2023 Jul;
18(1):9.
PMID: 37518001
Reconciling a non-binary gene tree with a binary species tree can be done efficiently in the absence of horizontal gene transfers, but becomes NP-hard in the presence of gene transfers....