Yusen Ye
Overview
Explore the profile of Yusen Ye including associated specialties, affiliations and a list of published articles.
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18
Citations
50
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Recent Articles
1.
Li J, Sun M, Ye Y, Gao L
BMC Genomics
. 2024 Nov;
25(1):1152.
PMID: 39614138
Background: Complex genomic rearrangements (CGRs) drive the restructuring of chromatin architecture, resulting in significant interactions among rearranged fragments, visible as anomalous interaction blocks in chromatin contact maps generated by chromosome...
2.
Wang W, Ye Y, Gao L
Brief Bioinform
. 2024 Jul;
25(4).
PMID: 39003726
Recent advances in chromatin conformation capture technologies, such as SPRITE and Pore-C, have enabled the detection of simultaneous contacts among multiple chromatin loci. This has made it possible to investigate...
3.
Xu H, Ye Y, Duan R, Gao Y, Hu Y, Gao L
Adv Sci (Weinh)
. 2024 May;
11(26):e2306770.
PMID: 38711214
Integrating multiple single-cell datasets is essential for the comprehensive understanding of cell heterogeneity. Batch effect is the undesired systematic variations among technologies or experimental laboratories that distort biological signals and...
4.
Ye Y, Qian J, Zhang X, Wang C, Xiao D, Cao T
Nano Lett
. 2023 Jul;
23(14):6536-6543.
PMID: 37432747
In this paper, we discuss a new moiré system where the long moiré periodicity emerges from two dissimilar van der Waals layers with vastly different lattice constants. We reconstruct the...
5.
Fan S, Dang D, Ye Y, Zhang S, Gao L, Zhang S
J Mol Cell Biol
. 2023 Jan;
15(1).
PMID: 36708167
Single-cell Hi-C technology provides an unprecedented opportunity to reveal chromatin structure in individual cells. However, high sequencing cost impedes the generation of biological Hi-C data with high sequencing depths and...
6.
Ye Y, Zhang S, Gao L, Zhu Y, Zhang J
Adv Sci (Weinh)
. 2023 Jan;
10(8):e2205162.
PMID: 36658736
The exploration of single-cell 3D genome maps reveals that chromatin domains are indeed physical structures presenting in single cells, and domain boundaries vary from cell to cell. However, systematic analysis...
7.
Li J, Gao L, Ye Y
PLoS Comput Biol
. 2023 Jan;
19(1):e1010760.
PMID: 36608109
Structural variations (SVs) play an essential role in the evolution of human genomes and are associated with cancer genetics and rare disease. High-throughput chromosome capture (Hi-C) technology probed all genome-wide...
8.
Ye Y, Zhou Z, Duan H
Front Psychol
. 2022 Oct;
13:1041476.
PMID: 36312055
As philanthropic sales live-streaming shopping have played an important role in alleviating the huge backlog of agricultural products during the outbreak of the COVID-19 pandemic, this paper aims to study...
9.
Ma K, Yan H, Ye Y, Zhou D, Ma D
Comput Intell Neurosci
. 2022 Jul;
2022:1105839.
PMID: 35832249
This paper comprehensively reviews the literature related to disaster relief supply management in recent years by taking the perspectives of three critical decision-making issues, i.e., coordination issues, facility location decisions,...
10.
Peng R, Ripin A, Ye Y, Zhu J, Wu C, Lee S, et al.
Nat Commun
. 2022 Mar;
13(1):1334.
PMID: 35289330
Excitons are elementary optical excitation in semiconductors. The ability to manipulate and transport these quasiparticles would enable excitonic circuits and devices for quantum photonic technologies. Recently, interlayer excitons in 2D...