Yeming Xie
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Explore the profile of Yeming Xie including associated specialties, affiliations and a list of published articles.
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25
Citations
530
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Recent Articles
1.
Wang Z, Wang Y, Zhou T, Chen S, Morris D, Magalhaes R, et al.
Elife
. 2024 Apr;
13.
PMID: 38639482
Despite rapid evolution across eutherian mammals, the X-linked family miRNAs are located in a region flanked by two highly conserved protein-coding genes ( and ) on the X chromosome. Intriguingly,...
2.
Xie Y, Ruan F, Li Y, Luo M, Zhang C, Chen Z, et al.
Elife
. 2024 Jan;
12.
PMID: 38236718
As the genome is organized into a three-dimensional structure in intracellular space, epigenomic information also has a complex spatial arrangement. However, most epigenetic studies describe locations of methylation marks, chromatin...
3.
Zhang C, Fang Y, Chen W, Chen Z, Zhang Y, Xie Y, et al.
Nucleic Acids Res
. 2023 Nov;
51(22):e112.
PMID: 37941145
We presented an experimental method called FLOUR-seq, which combines BD Rhapsody and nanopore sequencing to detect the RNA lifecycle (including nascent, mature, and degrading RNAs) in cells. Additionally, we updated...
4.
Wang Z, Wang Y, Zhou T, Chen S, Morris D, Magalhaes R, et al.
bioRxiv
. 2023 Jul;
PMID: 37398484
Despite rapid evolution across eutherian mammals, the X-linked family miRNAs are located in a region flanked by two highly conserved protein-coding genes ( and ) on the X chromosome. Intriguingly,...
5.
Weng Z, Ruan F, Chen W, Chen Z, Xie Y, Luo M, et al.
Genome Biol
. 2023 Mar;
24(1):61.
PMID: 36991510
Epigenetic modifications of histones are associated with development and pathogenesis of disease. Existing approaches cannot provide insights into long-range interactions and represent the average chromatin state. Here we describe BIND&MODIFY,...
6.
Chen W, Weng Z, Xie Z, Xie Y, Zhang C, Chen Z, et al.
Epigenetics Chromatin
. 2021 Aug;
14(1):40.
PMID: 34425889
Background: Although extrachromosomal DNA (ecDNA) has been intensively studied for several decades, the mechanisms underlying its tumorigenic effects have been revealed only recently. In most conventional sequencing studies, the high-throughput...
7.
Li W, Olseen A, Xie Y, Alexandru C, Outland A, Herrera A, et al.
J Muscle Res Cell Motil
. 2021 Jun;
42(2):219-231.
PMID: 34085177
Coordinated gastric smooth muscle contraction is critical for proper digestion and is adversely affected by a number of gastric motility disorders. In this study we report that the secreted protein...
8.
Yu T, Xie Y, Tang C, Wang Y, Yuan S, Zheng H, et al.
Biol Reprod
. 2021 Apr;
105(3):603-612.
PMID: 33929014
Previous studies have shown that Dnmt2-null sperm block the paternal transmission (through sperm) of certain acquired traits, e.g., high-fat diet-induced metabolic disorders or white tails due to a Kit paramutation....
9.
Tang C, Xie Y, Guo M, Yan W
Biol Reprod
. 2021 Mar;
105(1):267-277.
PMID: 33787835
Small noncoding RNAs deep sequencing (sncRNA-Seq) has become a routine for sncRNA detection and quantification. However, the software packages currently available for sncRNA annotation can neither recognize sncRNA variants in...
10.
Perrino B, Xie Y, Alexandru C
Methods Mol Biol
. 2020 Nov;
2217:71-81.
PMID: 33215378
The in situ proximity ligation assay (PLA) is capable of detecting single protein events such as protein protein-interactions and posttranslational modifications (e.g., protein phosphorylation) in tissue and cell samples prepared...