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Yaoqi Zhou

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Articles 214
Citations 5598
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Recent Articles
1.
Bin Amin A, Gao L, Zhou Y, Li X, Liu J, Zheng X, et al.
Langmuir . 2025 Jan; 41(1):614-623. PMID: 39757777
Highly efficient and durable electrocatalysts play a crucial role in promoting the hydrogen evolution reaction (HER). Among them, medium-entropy oxides (MEOs)-based electrocatalysts have attracted extensive attention due to the advantages...
2.
Ren Y, Lin X, Liao W, Peng X, Deng J, Zhang Z, et al.
Nucleic Acids Res . 2024 Dec; 53(3). PMID: 39721592
X-ray crystallography is a fundamental technique that provides atomic-level insights into RNA structures. However, obtaining crystals of RNA structures diffracting to high resolution is challenging. We introduce a simple strategy...
3.
Zhang Z, Hong X, Xiong P, Wang J, Zhou Y, Zhan J
Elife . 2024 Dec; 12. PMID: 39636683
Despite their importance in a wide range of living organisms, self-cleaving ribozymes in the human genome are few and poorly studied. Here, we performed deep mutational scanning and covariance analysis...
4.
Zhang J, Lang M, Zhou Y, Zhang Y
Trends Genet . 2024 Nov; PMID: 39492264
RNA functions by interacting with its intended targets structurally. However, due to the dynamic nature of RNA molecules, RNA structures are difficult to determine experimentally or predict computationally. Artificial intelligence...
5.
He T, Zhou Y, Li Y, Xie H, Shang Y, Chen T, et al.
Sci Rep . 2024 Oct; 14(1):22825. PMID: 39354044
The pore-throat structure is a crucial parameter for evaluating reservoir characteristics and assessing the potential of oil and gas resources. Understanding the relationship between reservoir pore-throat variations and oil-bearing properties...
6.
Chen K, Litfin T, Singh J, Zhan J, Zhou Y
Genomics Proteomics Bioinformatics . 2024 Jun; 22(1). PMID: 38872612
Recent success of AlphaFold2 in protein structure prediction relied heavily on co-evolutionary information derived from homologous protein sequences found in the huge, integrated database of protein sequences (Big Fantastic Database)....
7.
Rao X, Zhou K, Tu J, Lei Y, Li Q, Hong X, et al.
Biochem Biophys Res Commun . 2024 Jun; 724:150224. PMID: 38851139
Despite intensive search over the past decades, only a few small-molecule DNA fluorescent dyes were found with large Stokes shifts. These molecules, however, are often too toxic for widespread usage....
8.
Zhang X, Yin H, Ling F, Zhan J, Zhou Y
PLoS Comput Biol . 2023 Dec; 19(12):e1011330. PMID: 38060617
Recent advances in deep learning have significantly improved the ability to infer protein sequences directly from protein structures for the fix-backbone design. The methods have evolved from the early use...
9.
Zhou Y, Litfin T, Zhan J
Natl Sci Rev . 2023 Nov; 10(12):nwad259. PMID: 38033736
No abstract available.
10.
Zhou B, Ji B, Shen C, Zhang X, Yu X, Huang P, et al.
Nucleic Acids Res . 2023 Nov; 52(D1):D98-D106. PMID: 37953349
Long noncoding RNAs (lncRNAs) have emerged as crucial regulators across diverse biological processes and diseases. While high-throughput sequencing has enabled lncRNA discovery, functional characterization remains limited. The EVLncRNAs database is...