Tim De Pooter
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Explore the profile of Tim De Pooter including associated specialties, affiliations and a list of published articles.
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30
Citations
1525
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Recent Articles
1.
Mc Cartney A, Formenti G, Mouton A, De Panis D, Marins L, Leitao H, et al.
NPJ Biodivers
. 2024 Oct;
3(1):31.
PMID: 39407030
No abstract available.
2.
Mc Cartney A, Formenti G, Mouton A, De Panis D, Marins L, Leitao H, et al.
NPJ Biodivers
. 2024 Sep;
3(1):28.
PMID: 39289538
A genomic database of all Earth's eukaryotic species could contribute to many scientific discoveries; however, only a tiny fraction of species have genomic information available. In 2018, scientists across the...
3.
De Rijk P, Watzeels T, Kucukali F, Van Dongen J, Faura J, Willems P, et al.
Bioinformatics
. 2024 Sep;
40(9).
PMID: 39254601
Motivation: Existing nanopore single-cell data analysis tools showed severe limitations in handling current data sizes. Results: We introduce scywalker, an innovative and scalable package developed to comprehensively analyze long-read sequencing...
4.
Theys C, Ibrahim J, Mateiu L, Mposhi A, Garcia-Pupo L, De Pooter T, et al.
Int J Mol Sci
. 2023 Nov;
24(22).
PMID: 38003603
Metabolic dysfunction-associated steatotic liver disease (MASLD) is characterized by a constant accumulation of lipids in the liver. This hepatic lipotoxicity is associated with a dysregulation of the first step in...
5.
Dirkx N, Weuring W, De Vriendt E, Smal N, van de Vondervoort J, van t Slot R, et al.
BMC Biol
. 2023 Jul;
21(1):156.
PMID: 37443005
Background: Prime editing (PE) is the most recent gene editing technology able to introduce targeted alterations to the genome, including single base pair changes, small insertions, and deletions. Several improvements...
6.
Mposhi A, Cortes-Mancera F, Heegsma J, de Meijer V, van de Sluis B, Sydor S, et al.
Front Nutr
. 2023 Jun;
10:964337.
PMID: 37305089
Introduction: Hepatic lipid accumulation and mitochondrial dysfunction are hallmarks of metabolic associated fatty liver disease (MAFLD), yet molecular parameters underlying MAFLD progression are not well understood. Differential methylation within the...
7.
Wouters M, Bastiaanse H, Rombauts S, de Vries L, De Pooter T, Strazisar M, et al.
Plant Physiol
. 2023 May;
192(4):3001-3016.
PMID: 37139862
Arabidopsis (Arabidopsis thaliana) transfer DNA (T-DNA) insertion collections are popular resources for fundamental plant research. Cinnamoyl-CoA reductase 1 (CCR1) catalyzes an essential step in the biosynthesis of the cell wall...
8.
Valcek A, Philippe C, Whiteway C, Robino E, Nesporova K, Bove M, et al.
Microbiol Spectr
. 2022 Dec;
11(1):e0306122.
PMID: 36475894
Acinetobacter baumannii is an opportunistic pathogenic bacterium prioritized by WHO and CDC because of its increasing antibiotic resistance. Heterogeneity among strains represents the hallmark of A. baumannii bacteria. We wondered...
9.
Kucukali F, Neumann A, Van Dongen J, De Pooter T, Joris G, De Rijk P, et al.
Alzheimers Dement
. 2022 Dec;
19(6):2317-2331.
PMID: 36464806
Introduction: Despite increasing evidence of a role of rare genetic variation in the risk of Alzheimer's disease (AD), limited attention has been paid to its contribution to AD-related biomarker traits...
10.
Valcek A, Nesporova K, Whiteway C, De Pooter T, De Coster W, Strazisar M, et al.
Antimicrob Agents Chemother
. 2022 Aug;
66(9):e0089222.
PMID: 35969073
In this study, we characterize a new collection that comprises multidrug-resistant (MDR), extensively drug-resistant (XDR), pandrug-resistant (PDR), and carbapenem-resistant modern clinical isolates of Acinetobacter baumannii collected from hospitals through national...