Thomas R M Barends
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Explore the profile of Thomas R M Barends including associated specialties, affiliations and a list of published articles.
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84
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3205
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Recent Articles
11.
De Zitter E, Coquelle N, Oeser P, Barends T, Colletier J
Commun Biol
. 2022 Jun;
5(1):640.
PMID: 35768542
Unstable states studied in kinetic, time-resolved and ligand-based crystallography are often characterized by a low occupancy, which hinders structure determination by conventional methods. To automatically extract structural information pertaining to...
12.
Schmitz R, Picone N, Singer H, Dietl A, Seifert K, Pol A, et al.
mBio
. 2021 Sep;
12(5):e0170821.
PMID: 34544276
The methane-oxidizing bacterium Methylacidimicrobium thermophilum AP8 thrives in acidic geothermal ecosystems that are characterized by high degassing of methane (CH), H, HS, and by relatively high lanthanide concentrations. Lanthanides (atomic...
13.
Akram M, Bock J, Dietl A, Barends T
ACS Omega
. 2021 Sep;
6(33):21457-21464.
PMID: 34471748
Anaerobic ammonium oxidation (anammox) is a bacterial process in which ammonium and nitrite are combined into dinitrogen gas and water, yielding energy for the cell. This process relies on a...
14.
Dietl A, Barends T
Proteins
. 2021 Jul;
90(1):73-82.
PMID: 34310758
Anaerobic ammonium-oxidizing (anammox) bacteria express a distinct acyl carrier protein implicated in the biosynthesis of the highly unusual "ladderane" lipids these organisms produce. This "anammox-specific" ACP, or amxACP, shows several...
15.
Chicano T, Dietrich L, de Almeida N, Akram M, Hartmann E, Leidreiter F, et al.
Nat Microbiol
. 2021 Jul;
6(9):1129-1139.
PMID: 34267357
Nitrate is an abundant nutrient and electron acceptor throughout Earth's biosphere. Virtually all nitrate in nature is produced by the oxidation of nitrite by the nitrite oxidoreductase (NXR) multiprotein complex....
16.
Gorel A, Schlichting I, Barends T
IUCrJ
. 2021 Jul;
8(Pt 4):532-543.
PMID: 34258002
Serial femtosecond crystallography (SFX) at X-ray free-electron lasers (XFELs) is a novel tool in structural biology. In contrast to conventional crystallography, SFX relies on merging partial intensities acquired with X-ray...
17.
Akram M, Dietl A, Muller M, Barends T
Biopolymers
. 2021 Apr;
112(6):e23428.
PMID: 33798263
Anaerobic Ammonium Oxidation ("anammox") is a bacterial process in which nitrite and ammonium are converted into nitrogen gas and water, yielding energy for the cell. Anammox is an important branch...
18.
Grunbein M, Gorel A, Foucar L, Carbajo S, Colocho W, Gilevich S, et al.
Nat Commun
. 2021 Mar;
12(1):1672.
PMID: 33723266
X-ray free-electron lasers (XFELs) enable obtaining novel insights in structural biology. The recently available MHz repetition rate XFELs allow full data sets to be collected in shorter time and can...
19.
Schmitz R, Dietl A, Muller M, Berben T, Op den Camp H, Barends T
Acta Crystallogr F Struct Biol Commun
. 2020 May;
76(Pt 5):199-208.
PMID: 32356521
The enzyme 4-hydroxy-tetrahydrodipicolinate synthase (DapA) is involved in the production of lysine and precursor molecules for peptidoglycan synthesis. In a multistep reaction, DapA converts pyruvate and L-aspartate-4-semialdehyde to 4-hydroxy-2,3,4,5-tetrahydrodipicolinic acid....
20.
Nass K, Gorel A, Abdullah M, Martin A, Kloos M, Marinelli A, et al.
Nat Commun
. 2020 Apr;
11(1):1814.
PMID: 32286284
X-ray free-electron lasers (XFELs) enable crystallographic structure determination beyond the limitations imposed upon synchrotron measurements by radiation damage. The need for very short XFEL pulses is relieved through gating of...