Subrata Panja
Overview
Explore the profile of Subrata Panja including associated specialties, affiliations and a list of published articles.
Author names and details appear as published. Due to indexing inconsistencies, multiple individuals may share a name, and a single author may have variations. MedLuna displays this data as publicly available, without modification or verification
Snapshot
Snapshot
Articles
21
Citations
432
Followers
0
Related Specialties
Related Specialties
Top 10 Co-Authors
Top 10 Co-Authors
Published In
Affiliations
Affiliations
Soon will be listed here.
Recent Articles
1.
Korman A, Sun H, Hua B, Yang H, Capilato J, Paul R, et al.
Proc Natl Acad Sci U S A
. 2020 May;
117(22):12080-12086.
PMID: 32430319
Small ribozymes such as twister spontaneously cleave their own RNA when the ribozyme folds into its active conformation. The coupling between twister folding and self-cleavage has been difficult to study,...
2.
Panja S, Malecka E, Santiago-Frangos A, Woodson S
Methods Mol Biol
. 2020 Jan;
2106:19-39.
PMID: 31889249
Diverse types of RNA-binding proteins chaperone the interactions of noncoding RNAs by increasing the rate of RNA base pairing and by stabilizing the final RNA duplex. The E. coli protein...
3.
Jones C, Panja S, Woodson S, Ferre-DAmare A
Methods Enzymol
. 2019 Jun;
623:209-227.
PMID: 31239047
In the cell, RNAs fold and begin to function as they are being transcribed. In contrast, in the laboratory, RNAs are typically studied after transcription is completed. Co-transcriptional folding can...
4.
Hua B, Panja S, Wang Y, Woodson S, Ha T
J Am Chem Soc
. 2018 Aug;
140(32):10067-10070.
PMID: 30063835
Vectorial folding of RNA during transcription can produce intermediates with distinct biochemical activities. Here, we design an artificial minimal system to mimic cotranscriptional RNA folding in vitro. In this system,...
5.
Woodson S, Panja S, Santiago-Frangos A
Microbiol Spectr
. 2018 Jul;
6(4).
PMID: 30051798
RNA-binding proteins chaperone the biological functions of noncoding RNA by reducing RNA misfolding, improving matchmaking between regulatory RNA and targets, and exerting quality control over RNP biogenesis. Recent studies of...
6.
Djapgne L, Panja S, Brewer L, Gans J, Kane M, Woodson S, et al.
J Bacteriol
. 2018 Mar;
200(10).
PMID: 29507088
is an opportunistic Gram-negative pathogen that requires iron for growth and virulence. Under low-iron conditions, transcribes two highly identical (95%) small regulatory RNAs (sRNAs), PrrF1 and PrrF2, which are required...
7.
Panja S, Hua B, Zegarra D, Ha T, Woodson S
Nat Chem Biol
. 2017 Aug;
13(10):1109-1114.
PMID: 28825710
Twister is a small ribozyme present in almost all kingdoms of life that rapidly self-cleaves in variety of divalent metal ions. We used activity assays, bulk FRET and single-molecule FRET...
8.
Zheng A, Panja S, Woodson S
J Mol Biol
. 2016 Apr;
428(11):2259-2264.
PMID: 27049793
The Sm-protein Hfq facilitates interactions between small non-coding RNA (sRNA) and target mRNAs. In enteric Gram-negative bacteria, Hfq is required for sRNA regulation, and hfq deletion results in stress intolerance...
9.
Panja S, Santiago-Frangos A, Schu D, Gottesman S, Woodson S
J Mol Biol
. 2015 Jul;
427(22):3491-3500.
PMID: 26196441
Hfq facilitates gene regulation by small non-coding RNAs (sRNAs), thereby affecting bacterial attributes such as biofilm formation and virulence. Escherichia coli Hfq recognizes specific U-rich and AAN motifs in sRNAs...
10.
Panja S, Paul R, Greenberg M, Woodson S
Angew Chem Int Ed Engl
. 2015 May;
54(25):7281-4.
PMID: 25959666
Non-coding antisense RNAs regulate bacterial genes in response to nutrition or environmental stress, and can be engineered for artificial gene control. The RNA chaperone Hfq accelerates antisense pairing between non-coding...