Stefan K Solntsev
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Explore the profile of Stefan K Solntsev including associated specialties, affiliations and a list of published articles.
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8
Citations
303
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Recent Articles
1.
Miller R, Millikin R, Hoffmann C, Solntsev S, Sheynkman G, Shortreed M, et al.
J Proteome Res
. 2019 Aug;
18(9):3429-3438.
PMID: 31378069
Peptides detected by tandem mass spectrometry (MS/MS) in bottom-up proteomics serve as proxies for the proteins expressed in the sample. Protein inference is a process routinely applied to these peptides...
2.
Rolfs Z, Solntsev S, Shortreed M, Frey B, Smith L
J Proteome Res
. 2018 Oct;
18(1):349-358.
PMID: 30346791
Post-translationally spliced peptides have recently garnered significant interest as potential targets for cancer immunotherapy and as contributors to autoimmune diseases such as type 1 diabetes, yet feasible identification methods for...
3.
Lu L, Millikin R, Solntsev S, Rolfs Z, Scalf M, Shortreed M, et al.
J Proteome Res
. 2018 May;
17(7):2370-2376.
PMID: 29793340
Protein chemical cross-linking combined with mass spectrometry has become an important technique for the analysis of protein structure and protein-protein interactions. A variety of cross-linkers are well developed, but reliable,...
4.
Solntsev S, Shortreed M, Frey B, Smith L
J Proteome Res
. 2018 Mar;
17(5):1844-1851.
PMID: 29578715
Correct identification of protein post-translational modifications (PTMs) is crucial to understanding many aspects of protein function in biological processes. G-PTM-D is a recently developed technique for global identification and localization...
5.
LeDuc R, Schwammle V, Shortreed M, Cesnik A, Solntsev S, Shaw J, et al.
J Proteome Res
. 2018 Feb;
17(3):1321-1325.
PMID: 29397739
The Consortium for Top-Down Proteomics (CTDP) proposes a standardized notation, ProForma, for writing the sequence of fully characterized proteoforms. ProForma provides a means to communicate any proteoform by writing the...
6.
Schaffer L, Shortreed M, Cesnik A, Frey B, Solntsev S, Scalf M, et al.
Anal Chem
. 2017 Dec;
90(2):1325-1333.
PMID: 29227670
In top-down proteomics, intact proteins are analyzed by tandem mass spectrometry and proteoforms, which are defined forms of a protein with specific sequences of amino acids and localized post-translational modifications,...
7.
Cesnik A, Shortreed M, Schaffer L, Knoener R, Frey B, Scalf M, et al.
J Proteome Res
. 2017 Dec;
17(1):568-578.
PMID: 29195273
We present an open-source, interactive program named Proteoform Suite that uses proteoform mass and intensity measurements from complex biological samples to identify and quantify proteoforms. It constructs families of proteoforms...
8.
Millikin R, Solntsev S, Shortreed M, Smith L
J Proteome Res
. 2017 Oct;
17(1):386-391.
PMID: 29083185
The rapid and accurate quantification of peptides is a critical element of modern proteomics that has become increasingly challenging as proteomic data sets grow in size and complexity. We present...