Simon Bray
Overview
Explore the profile of Simon Bray including associated specialties, affiliations and a list of published articles.
Author names and details appear as published. Due to indexing inconsistencies, multiple individuals may share a name, and a single author may have variations. MedLuna displays this data as publicly available, without modification or verification
Snapshot
Snapshot
Articles
14
Citations
66
Followers
0
Related Specialties
Related Specialties
Top 10 Co-Authors
Top 10 Co-Authors
Published In
Affiliations
Affiliations
Soon will be listed here.
Recent Articles
1.
Ciocan C, Jha K, Annels C, Kozloski R, Steyl I, Bray S
Glob Chang Biol
. 2024 Sep;
30(9):e17520.
PMID: 39319682
No abstract available.
2.
Ciocan C, Annels C, Fitzpatrick M, Couceiro F, Steyl I, Bray S
J Hazard Mater
. 2024 May;
472:134619.
PMID: 38754228
Classified as marine debris, man made materials are polluting the world's oceans. Recently, glass reinforced plastic (GRP) has been shown to degrade and contaminate the coasts. In this pioneering study,...
3.
Bray S, Chilton J, Bernt M, Soranzo N, van den Beek M, Batut B, et al.
Genome Res
. 2023 Feb;
33(2):261-268.
PMID: 36828587
There are thousands of well-maintained high-quality open-source software utilities for all aspects of scientific data analysis. For more than a decade, the Galaxy Project has been providing computational infrastructure and...
4.
Bray S, Tanzel V, Wolf S
J Chem Inf Model
. 2022 Sep;
62(19):4591-4604.
PMID: 36176219
We present two methods to reveal protein-ligand unbinding mechanisms in biased unbinding simulations by clustering trajectories into ensembles representing unbinding paths. The first approach is based on a contact principal...
5.
Bray S, Dudgeon T, Skyner R, Backofen R, Gruning B, von Delft F
J Cheminform
. 2022 Apr;
14(1):22.
PMID: 35414112
We present several workflows for protein-ligand docking and free energy calculation for use in the workflow management system Galaxy. The workflows are composed of several widely used open-source tools, including...
6.
Maier W, Bray S, van den Beek M, Bouvier D, Coraor N, Miladi M, et al.
Nat Biotechnol
. 2021 Sep;
39(10):1178-1179.
PMID: 34588690
No abstract available.
7.
Gu Q, Kumar A, Bray S, Creason A, Khanteymoori A, Jalili V, et al.
PLoS Comput Biol
. 2021 Jun;
17(6):e1009014.
PMID: 34061826
Supervised machine learning is an essential but difficult to use approach in biomedical data analysis. The Galaxy-ML toolkit (https://galaxyproject.org/community/machine-learning/) makes supervised machine learning more accessible to biomedical scientists by enabling...
8.
Rowson M, Bennett C, Azeem M, Magdysyuk O, Rouse J, Lye R, et al.
J Synchrotron Radiat
. 2021 May;
28(Pt 3):790-803.
PMID: 33949987
The widespread use and development of inertia friction welding is currently restricted by an incomplete understanding of the deformation mechanisms and microstructure evolution during the process. Understanding phase transformations and...
9.
Maier W, Bray S, van den Beek M, Bouvier D, Coraor N, Miladi M, et al.
bioRxiv
. 2021 Apr;
PMID: 33791701
The COVID-19 pandemic is the first global health crisis to occur in the age of big genomic data.Although data generation capacity is well established and sufficiently standardized, analytical capacity is...
10.
Richir J, Bray S, McAleese T, Watson G
Data Brief
. 2021 Mar;
35:106901.
PMID: 33763507
The present Data In Brief methodological paper details the acquisition, mining and pre-processing of elemental concentration data in marine sediments (coastal and open sea) of Southern England, presented and discussed...