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Shuzhao Li

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Articles 78
Citations 7690
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Recent Articles
1.
Chi Y, Mitchell J, Li S
bioRxiv . 2025 Feb; PMID: 39975275
No abstract available.
2.
Cortese M, Hagan T, Rouphael N, Wu S, Xie X, Kazmin D, et al.
Nat Immunol . 2025 Jan; 26(1):116-130. PMID: 39747435
We performed a systems vaccinology analysis to investigate immune responses in humans to an H5N1 influenza vaccine, with and without the AS03 adjuvant, to identify factors influencing antibody response magnitude...
3.
Metz T, Chang C, Gautam V, Anjum A, Tian S, Wang F, et al.
Anal Chem . 2024 Dec; 97(1):1-11. PMID: 39699939
Methods for assessing compound identification confidence in metabolomics and related studies have been debated and actively researched for the past two decades. The earliest effort in 2007 focused primarily on...
4.
Mitchell J, Chi Y, Zheng S, Thapa M, Wang E, Li S
J Am Soc Mass Spectrom . 2024 Sep; 35(12):2824-2835. PMID: 39348378
Stable isotope tracing is a crucial technique for understanding the metabolic wiring of biological systems, determining metabolic flux through pathways of interest, and detecting novel metabolites and pathways. Despite the...
5.
Metz T, Chang C, Gautam V, Anjum A, Tian S, Wang F, et al.
bioRxiv . 2024 Aug; PMID: 39131324
Methods for assessing compound identification confidence in metabolomics and related studies have been debated and actively researched for the past two decades. The earliest effort in 2007 focused primarily on...
6.
Mitchell J, Chi Y, Thapa M, Pang Z, Xia J, Li S
PLoS Comput Biol . 2024 Jun; 20(6):e1011912. PMID: 38843301
To standardize metabolomics data analysis and facilitate future computational developments, it is essential to have a set of well-defined templates for common data structures. Here we describe a collection of...
7.
Pang Z, Lu Y, Zhou G, Hui F, Xu L, Viau C, et al.
Nucleic Acids Res . 2024 Apr; 52(W1):W398-W406. PMID: 38587201
We introduce MetaboAnalyst version 6.0 as a unified platform for processing, analyzing, and interpreting data from targeted as well as untargeted metabolomics studies using liquid chromatography - mass spectrometry (LC-MS)....
8.
Mitchell J, Chi Y, Thapa M, Pang Z, Xia J, Li S
bioRxiv . 2024 Feb; PMID: 38405981
To standardize metabolomics data analysis and facilitate future computational developments, it is essential is have a set of well-defined templates for common data structures. Here we describe a collection of...
9.
Li S, Siddiqa A, Thapa M, Chi Y, Zheng S
Nat Commun . 2023 Jul; 14(1):4113. PMID: 37433854
Significant challenges remain in the computational processing of data from liquid chomratography-mass spectrometry (LC-MS)-based metabolomic experiments into metabolite features. In this study, we examine the issues of provenance and reproducibility...
10.
Siddiqa A, Wang Y, Thapa M, Martin D, Cadar A, Bartley J, et al.
NPJ Vaccines . 2023 Jun; 8(1):92. PMID: 37308481
Many human diseases, including metabolic diseases, are intertwined with the immune system. The understanding of how the human immune system interacts with pharmaceutical drugs is still limited, and epidemiological studies...