Rushil Chakrabarty
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Explore the profile of Rushil Chakrabarty including associated specialties, affiliations and a list of published articles.
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10
Citations
194
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Recent Articles
1.
Hunker A, Mich J, Taskin N, Torkelson A, Pham T, Bertagnolli D, et al.
bioRxiv
. 2025 Jan;
PMID: 39868122
-acting regulatory enhancer elements are valuable tools for gaining cell type-specific genetic access. Leveraging large chromatin accessibility atlases, putative enhancer sequences can be identified and deployed in adeno-associated virus (AAV)...
2.
Gao Y, van Velthoven C, Lee C, Thomas E, Bertagnolli D, Carey D, et al.
bioRxiv
. 2025 Jan;
PMID: 39829740
The mammalian cortex is composed of a highly diverse set of cell types and develops through a series of temporally regulated events that build out the cell type and circuit...
3.
Jin K, Yao Z, van Velthoven C, Kaplan E, Glattfelder K, Barlow S, et al.
Nature
. 2025 Jan;
638(8049):182-196.
PMID: 39743592
Biological ageing can be defined as a gradual loss of homeostasis across various aspects of molecular and cellular function. Mammalian brains consist of thousands of cell types, which may be...
4.
Gabitto M, Travaglini K, Rachleff V, Kaplan E, Long B, Ariza J, et al.
Nat Neurosci
. 2024 Oct;
27(12):2366-2383.
PMID: 39402379
Alzheimer's disease (AD) is the leading cause of dementia in older adults. Although AD progression is characterized by stereotyped accumulation of proteinopathies, the affected cellular populations remain understudied. Here we...
5.
Hunker A, Wirthlin M, Gill G, Johansen N, Hooper M, Omstead V, et al.
bioRxiv
. 2024 Oct;
PMID: 39386678
We present an enhancer AAV toolbox for accessing and perturbing striatal cell types and circuits. Best-in-class vectors were curated for accessing major striatal neuron populations including medium spiny neurons (MSNs),...
6.
Kussick E, Johansen N, Taskin N, Wynalda B, Martinez R, Groce E, et al.
bioRxiv
. 2024 Aug;
PMID: 39131318
Experimental access to cell types within the mammalian spinal cord is severely limited by the availability of genetic tools. To enable access to lower motor neurons (LMNs) and LMN subtypes,...
7.
van Velthoven C, Gao Y, Kunst M, Lee C, McMillen D, Chakka A, et al.
bioRxiv
. 2024 Jul;
PMID: 38948843
The telencephalon of the mammalian brain comprises multiple regions and circuit pathways that play adaptive and integrative roles in a variety of brain functions. There is a wide array of...
8.
Ben-Simon Y, Hooper M, Narayan S, Daigle T, Dwivedi D, Way S, et al.
bioRxiv
. 2024 Jun;
PMID: 38915722
The mammalian cortex is comprised of cells classified into types according to shared properties. Defining the contribution of each cell type to the processes guided by the cortex is essential...
9.
Jin K, Yao Z, van Velthoven C, Kaplan E, Glattfelder K, Barlow S, et al.
bioRxiv
. 2024 Jan;
PMID: 38168182
Biological aging can be defined as a gradual loss of homeostasis across various aspects of molecular and cellular function. Aging is a complex and dynamic process which influences distinct cell...
10.
Yao Z, van Velthoven C, Kunst M, Zhang M, McMillen D, Lee C, et al.
Nature
. 2023 Dec;
624(7991):317-332.
PMID: 38092916
The mammalian brain consists of millions to billions of cells that are organized into many cell types with specific spatial distribution patterns and structural and functional properties. Here we report...